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phenoData
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554
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Made a pDATA manually for HTqPCR procedure
HTqPCR
phenoData
esetVis
pData
2.5 years ago
Marcelo Laia
▴ 450
0
votes
3
replies
1.4k
views
ReadAffy does not take into account parameter sampleNames with phenoData object
affycoretools
ReadAffy
Biobase
phenoData
affy
updated 3.3 years ago by
James W. MacDonald
65k • written 3.4 years ago by
bastien_chassagnol
• 0
0
votes
0
replies
722
views
Sample grouping (phenoData) and visualization in R package- HtqPCR
HtqPCR
grouping
visualization
R
phenoData
4.7 years ago
mohammedtoufiq91
▴ 10
1
vote
1
reply
2.0k
views
Loading FCS files
FCS
flow cytometry
bioconductor
phenoData
Loading Data
updated 7.3 years ago by
SamGG
▴ 350 • written 7.3 years ago by
smajor
• 0
4 results • Page
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Comment: Deseq2. decontXcounts not integers. Useful alternative?
by
ATpoint
★ 4.0k
I do not know this decontamination tool you use but generally: If these counts are basically "corrected" raw counts in the sense that they'…
Answer: Improving the design matrices vignette in RNAseq123
by
Gordon Smyth
50k
Thanks to Shian Su, we have confirmed that the problem in the design matrices vignette html is caused by a bug in knitr 1.44 (to do with sp…
Comment: Opposite sign of LFC in count plots of DEGs (DESeq2)
by
winwater0928
• 0
Thank you for your comment! I'll review my code from top to bottom.
Comment: Math expression in shapeCustom legend in EnhancedVolcano
by
James W. MacDonald
65k
So basically you are using HTML markup to set your subscripts and whatnot, and then `element_markdown` does the rest.
Comment: Math expression in shapeCustom legend in EnhancedVolcano
by
James W. MacDonald
65k
Oh snap. Foiled again. Here it is with spaces & ge ; and & lt ;
Votes
Comment: Opposite sign of LFC in count plots of DEGs (DESeq2)
biomaRt error: database disk image is malformed
Comment: biomaRt : No lock file for BiocFileCache
Answer: Cross-species analysis - how to compute the mid parent value?
Answer: Batch/method effect correction on a cohort of patients with RUVseq and DESeq2
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