Bioconductor Plottracks

Showing : plottracks • reset

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585

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Gviz plotTracks

updated 3.3 years ago by Robert Ivanek ▴ 730 • written 3.3 years ago by syliang • 0

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1.0k

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gviz plottracks generegiontrack

4.5 years ago gpwhiz ▴ 10

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902

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gviz gviz-package datatrack plottracks

5.3 years ago stephen.williams ▴ 10

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2.1k

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Gviz-package biomart plottracks ucsctrack stickleback

updated 6.2 years ago by florian.hahne@novartis.com ★ 1.6k • written 6.3 years ago by br • 0

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849

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gviz plottracks ideogramtrack

6.3 years ago cristianrohr768 • 0

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946

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gviz plottracks alignmentstrack

updated 6.3 years ago by hesham.gibriel • 0 • written 6.3 years ago by TimothéeFlutre ▴ 80

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1.0k

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gviz granges plottracks

6.4 years ago Adam • 0

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701

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Gviz plotTracks

6.4 years ago rubi ▴ 110

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977

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Gviz plotTracks stacking

updated 6.8 years ago by florian.hahne@novartis.com ★ 1.6k • written 6.8 years ago by shuoguo ▴ 10

9 results • Page 1 of 1

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Answer: multiple filters in biomaRt by RuBBiT0 ▴ 10

First, yes, one gene could be related to several GO ID, and the result is based on the annotation package you use. Second, could you pro…

Comment: Diffbind "No genome detected" by kyliecode • 0

Hi Dr. Stark, Thanks very much for your reply! The bam files were output from nf-core/chipseq pipeline and for some reason, they do not ha…

Answer: Discrepancy between DESeq2 files produced in Galaxy and R(RStudio) by Michael Love 40k

I guess that Galaxy may be using some kind of LFC shrinkage, but without seeing their code I wouldn't know for sure. Shrinkage generally…

Comment: TCGAbiolinks cannot find bcr_patient_barcode by Habil Zare ▴ 170

I checked your example with the devel version 2.29.6 on Bioc and it worked fine. Thanks for the fix!

Answer: error in ChAMP loading file by jenniferbrowngates • 0

I got a lot of information from this website about different topics which is beneficial for me too so I thank this site and also suggest a …

Votes

Answer: Using PEER to identify hidden confounders in RNA-seq data (not working)

Comment: Error: biomaRt has encountered an unexpected server error.

Comment: Interpret plot from DiffBind

Awards • All

Scholar to Tiago C. Silva ▴ 270