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Answer: Using featureCounts and downloading Rsubread
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You need to tell `BiocManager;;install` that you want to install the `Rsubread` package.
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BiocManager::install("Rsubread")
library(…
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Dear ATpoint
I am exactly looking for read/gene count from BAM/SAM file either through ht-seq or feature count
feature count giving me 0% s…
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There is the ncbiRefSeqSelect table that has the MANE and RefSeq Select transcripts. It's not just the MANE though.
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Thank you, Gordon, for your reply.
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