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News:
Last Call: Nominations for Bioconductor Awards 2024! Deadline May 15
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Bioconductor
Bioc204
22 months ago • updated 20 months ago
shepherl
4.3k
1
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720
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News:
Nominations for Bioconductor Awards 2024!
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Bioconductor
Bioc2024
23 months ago • updated 22 months ago
shepherl
4.3k
0
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0
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675
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News:
May 31st is the last day to nominate for Bioc2023 Awards!
Bioconductor
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Bioc2023
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2.7 years ago
shepherl
4.3k
1
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Bioconductor
Bioc2023
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2.7 years ago
shepherl
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910
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Bioc2023
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2.7 years ago
shepherl
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1.0k
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Bioconductor
Bioc2023
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2.8 years ago • updated 2.7 years ago
shepherl
4.3k
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Bioconductor Long-term Contribution Award
Bioc2023
Bioconductor
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2.7 years ago
shepherl
4.3k
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0
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897
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News:
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Bioconductor
Bioc2023
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2.8 years ago • updated 2.7 years ago
shepherl
4.3k
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Bioconductor Scientific or Informatic Technology Advancement Award!
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Bioc2022
Bioconductor
written 3.7 years ago by
shepherl
4.3k
1
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2
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Bioc2022
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shepherl
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Bioc2022
Bioconductor
3.7 years ago
shepherl
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Bioconductor Long-term Contribution Award
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Bioc2022
Bioconductor
3.8 years ago
shepherl
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0
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0
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898
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Bioc2022
Bioconductor
3.8 years ago
shepherl
4.3k
0
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1.0k
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Bioconductor
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3.8 years ago
shepherl
4.3k
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1.0k
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Bioc2022
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Bioconductor
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3.8 years ago
shepherl
4.3k
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1.2k
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Bioconductor
Bioc2021
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4.7 years ago
shepherl
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1.1k
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Bioc2021
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4.7 years ago
shepherl
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1.2k
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shepherl
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Bioc2021
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Bioconductor
4.7 years ago
shepherl
4.3k
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1.2k
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Bioconductor
4.7 years ago
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Bioc2021
4.8 years ago
shepherl
4.3k
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bioc2020
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5.6 years ago
shepherl
4.3k
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5.6 years ago
shepherl
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5.6 years ago
shepherl
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5.6 years ago
shepherl
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1.2k
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5.6 years ago
shepherl
4.3k
4
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Bioc2020
Bioconductor
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5.8 years ago • updated 5.6 years ago
shepherl
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Comment: Making a Full Rank Model for Allele-Specific Expression with DESeq2
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chp265
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Confirming my understanding after executing the code provided: this is similar to a design formula of `~0+mouse+group+group:allele`, except…
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Thanks heaps Gordon. I went with option 1 and no normalisation and all seems to have worked well. Cheers, Andrew
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Flagging protein groups as likely contaminants in this way will be fine for a limpa analysis. The `Cont_` proteins can optionally stay in f…
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Aaron Lun was a PhD student in my Lab back in 2015, when he posted the answers about allele-specific expression that you and Mike Love have…
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You just need the mouse identifier (controls baseline) and the group specific allelic effect.
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