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riboseqr
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704
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package ‘riboSeqR’ is not available for this version of R
Bioconductor
riboSeqR
12 months ago
Javier
• 0
0
votes
0
replies
482
views
Reference span vs. width of read in riboseqR
riboSeqR
4.0 years ago
ni2239
• 0
0
votes
1
reply
541
views
riboSeqR readRibodata fail in IRanges
riboSeqR
4.6 years ago
Hui.Pan
• 0
0
votes
2
replies
930
views
aroundPromoter function in RiboSeqR gives error
riboseqr
5.5 years ago
amir.mahboubi.79
• 0
2
votes
3
replies
1.1k
views
Problem in reading .bam files (aligned to transcriptome) with ribofileCR function
R
riboseqr
ribosome profiling
6.2 years ago
bsad
• 0
0
votes
3
replies
1.4k
views
Error in frameCounting using riboSeqR
riboseq
R
riboseqr
6.7 years ago
yingyingguo0228
• 0
1
vote
2
replies
1.6k
views
error in frameCounting in riboSeqR
riboseqr
ribosome profiling
updated 8.2 years ago by
Thomas J Hardcastle
▴ 180 • written 8.2 years ago by
alper.celik
• 0
0
votes
2
replies
1.6k
views
error in callingFrames : riboSeqR
R
riboseqr
ribosome profiling
8.5 years ago
ohtack9
• 0
1
vote
3
replies
1.2k
views
error in loading Riboseq
software error
riboseqr
8.5 years ago
yyu
• 0
1
vote
0
replies
1.6k
views
Job:
PhD Student in Computational Biology
differential gene expression
rnaseq
riboseqr
computational biology
Job
8.6 years ago
Bernd Fischer
▴ 550
0
votes
1
reply
1.1k
views
riboSeqR: legend in plotFS
riboseqr
updated 9.0 years ago by
Thomas J Hardcastle
▴ 180 • written 9.0 years ago by
antonvila.s
• 0
0
votes
0
replies
930
views
legend in plotFS
riboseqr
9.0 years ago
antonvila.s
• 0
0
votes
1
reply
1.0k
views
riboSeqR: plotTranscript error
riboSeqR
updated 9.1 years ago by
Thomas J Hardcastle
▴ 180 • written 9.1 years ago by
antonvila.s
• 0
0
votes
0
replies
922
views
riboSeqR: questions on plotTranscript function
riboseqr
9.2 years ago
antonvila.s
• 0
0
votes
1
reply
1.2k
views
riboSeqR: criteria used to determine reading frames
riboSeqR
updated 9.2 years ago by
Thomas J Hardcastle
▴ 180 • written 9.2 years ago by
antonvila.s
• 0
0
votes
1
reply
1.1k
views
riboSeqR: plotTranscript function not showing coverage
riboseqr
updated 9.2 years ago by
Thomas J Hardcastle
▴ 180 • written 9.2 years ago by
antonvila.s
• 0
0
votes
0
replies
1.3k
views
riboSeqR: interpret plots generated by plotTranscript function
riboSeqR
plotTranscript function
9.5 years ago
Laura.Fancello
• 0
1
vote
3
replies
1.6k
views
RiboSeqR package input file format
riboSeqR
updated 9.6 years ago by
Thomas J Hardcastle
▴ 180 • written 9.6 years ago by
Laura.Fancello
• 0
18 results • Page
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Comment: fgsea significant result
by
Chris
• 0
Thanks ATpoint! Setting a fixed seed can reproduce the same result. However, if someone else analyze the same data with different seed, the…
Comment: SGSeq: moving toward diffex from SGSeq analysis
by
Sara
• 0
Thank you for your response. I have another question about saving the sgvc result as a CSV file. I would appreciate your help, please. ``` …
Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package)
by
Poonam
• 0
I tried different block lengths first and considered 100000 to be ideal because of the almost similar inter-range distance. S1= bootRange…
Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package)
by
Michael Love
41k
The segmentation and block length are key parameters. We recommend for example blocks of length ~500kb. It would help if you would post yo…
Answer: Handling multiple differential expression comparisons
by
Michael Love
41k
It's typical that results are presented with each group having its own FDR control. So presenting each comparison with the adjusted p-va…
Votes
Answer: fgsea significant result
Answer: fgsea significant result
package goseq seems to be not available on the latest version of R
package goseq seems to be not available on the latest version of R
Print Differentially Expressed Exons From Dexseq Results
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