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scan
•
reset
1
vote
7
replies
1.8k
views
Ballgown object construction error
ballgown
scan
error
package
6.9 years ago
spaque57
• 0
1
vote
5
replies
1.8k
views
Log2FC values very small with SCAN
scan
Log2FC
updated 8.8 years ago by
Gordon Smyth
50k • written 8.8 years ago by
Vani
▴ 20
0
votes
4
replies
1.2k
views
Issues with normalizing viral-infected single cell data
scan
scater
single cell
normalization
updated 4.1 years ago by
Aaron Lun
★ 28k • written 4.1 years ago by
Jenny Drnevich
★ 2.0k
0
votes
3
replies
1.2k
views
Comparing SCAN Q.value with Meta-Analyses Q.Value
scan.upc
scan
meta
q value
8.4 years ago
Jo
▴ 30
0
votes
0
replies
1.3k
views
scan() error when using biomaRt::getBM()
biomart
scan
error
8.6 years ago
enricoferrero
▴ 660
0
votes
0
replies
2.0k
views
Wait for user input with readline() while running a whole set of program
readline
scan
6.8 years ago
shadhiksk
• 0
6 results • Page
1 of 1
Recent ...
Replies
Comment: Why p value inconsistent when using different number of pathway score?
by
Chris
• 0
Hi Robert, if two conditions don't have hundreds of differential express genes ( in some conditions such as peripheral blood Alzheimer vs n…
Answer: Dominance Index for Shotgun Metagenomics Data
by
Leo Lahti
▴ 40
1. Note that Simpson's dominance index (\lambda) is a different index than inverse Simpson (1/\lambda) or reciprocal Simpson (1-\lambda). T…
Comment: Math expression in shapeCustom legend in EnhancedVolcano
by
pl23
• 0
Thank you very much - that worked perfectly! Word of warning to those who try this: it screws up the other legends because of the markdown …
Answer: PCA plot suggestions
by
Michael Love
41k
For help with interpretation and design of analysis, I recommend working with a local statistician. Due to time restrictions, I can only…
Comment: DESeq2 Error in `.rowNamesDF<-`(x, value = value): Invalid 'row.names' length
by
ussarizona
▴ 10
Hi Michael, Yes, I could figure it out what does the error mean. In my matrix I had the first colum GeneID while in my condition I only h…
Votes
Answer: Dominance Index for Shotgun Metagenomics Data
Answer: Math expression in shapeCustom legend in EnhancedVolcano
Comment: DESeq2 Error in `.rowNamesDF<-`(x, value = value): Invalid 'row.names' length
Comment: Deseq2. decontXcounts not integers. Useful alternative?
Comment: Opposite sign of LFC in count plots of DEGs (DESeq2)
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Leo Lahti
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James W. MacDonald
65k
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shepherl
3.8k
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Michael Love
41k
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