Showing : scuttle • reset
2
votes
5
replies
1.1k
views
scuttle::perFeatureQCMetrics runs very slow for big scRNA-seq data
scuttle
updated 11 months ago by ★ 29k • written 11 months ago by ▴ 10
2
votes
1
reply
983
views
Existence of Bioconductor versus Seurat Software Ecosystems Quantitative Comparison
scran bluster scater scuttle
updated 19 months ago by ★ 5.0k • written 19 months ago by ★ 1.6k
0
votes
3
replies
2.1k
views
Is logNormCounts log2 normalised counts as default?
scuttle scater
updated 2.2 years ago by ★ 5.0k • written 2.2 years ago by • 0
1
vote
0
replies
2.8k
views
Convert SpatialExperiment Object to Seurat Object
scuttle scater seurat SpatialExperiment
2.8 years ago cathalgking ▴ 10
0
votes
1
reply
1.3k
views
cell_count column in SpatialExperiment Object
scuttle scater SpatialExperiment
updated 2.8 years ago by ▴ 160 • written 2.8 years ago by ▴ 10
2
votes
2
replies
2.1k
views
scuttle:: librarySizeFactors returning non-finite values
normalizeCounts scran librarySizeFactors scuttle scRNAseq
3.7 years ago behr201 • 0
3
votes
3
replies
2.6k
views
Ensuring reproducibility in BiocParallel SingleCellExperiment workflows
scater SingleCellExperiment BiocParallel scuttle scran
4.1 years ago • updated 4.0 years ago enricoferrero ▴ 680
4
votes
5
replies
3.8k
views
scuttle::aggregateAcrossCells() crashes R on large SingleCellExperiment
scran SingleCellExperiment scuttle scater
updated 4.8 years ago by ★ 29k • written 4.8 years ago by ▴ 680
5
votes
4
replies
8.5k
views
scRNA-seq pseudo-bulk differential expression analysis with pseudobulkDGE()
scran scater scuttle
updated 5.3 years ago by ★ 29k • written 5.3 years ago by ▴ 680
9 results • Page 1 of 1
Recent ...
Replies
Comment: How to reverse complement some elements of a DNAStringSet by Lenson • 0
Hey, thanks for the insightful post! I totally get what you mean about the learning process. Sometimes you try a new approach and it just d…
Comment: Research and Service Group Leader positions in AI in Biology at EMBL by eja.gssssswssswwse.r.m • 0
For mobile gamers seeking innovative experiences, free download ck999 game brings engaging gameplay right to your device. Whether exploring…
Comment: What R/Bioconductor tools would you recommend for the analysis of sncRNA, specif by Matthew Thornton ▴ 380
WOW! Thank you so much for the information. I will do this.
Comment: "Watched Tags" are being erased rather than updated by RalphSavage99 • 0
Thanks for sharing https://github.com/Bioconductor/support.bioconductor.org/issues/112
Answer: Add additional maintainer for MOFA2 by shepherl 4.2k
These requests are best on the bioc-devel @ r-project.org or a request to maintainer @ bioconductor.org -- We would ideally need the curre…
Votes
Answer: What R/Bioconductor tools would you recommend for the analysis of sncRNA, specif
Using edgeR or DESeq2 to analyze allele-specific expression?
Answer: DESeq2 design for haplotype MPRA
Answer: Failure to download resources (MeSHDb) from AnnotationHub
Answer: Failure to download resources (MeSHDb) from AnnotationHub
Awards • All
Scholar to shepherl 4.2k
Scholar to James W. MacDonald 68k
Popular Question to Daniel Cameron ▴ 40
Popular Question to Peter Hickey ▴ 760
Popular Question to edward.esiribloom • 0
Locations • All
India, 16 minutes ago
WEHI, Melbourne, Australia, 29 minutes ago
Vietnam, 2 hours ago
Brazil, 3 hours ago
United States, 4 hours ago
Traffic: 2882 users visited in the last hour
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6