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VariantAnnotation docker trio

updated 18 months ago by ATpoint ★ 4.5k • written 18 months ago by sethberke • 0

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8.0 years ago nuch_tiwaporn • 0

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RNASeq Cancer trio AllelicImbalance RNASeq Cancer trio AllelicImbalance

updated 10.9 years ago by Jesper Robert Gadin ▴ 20 • written 10.9 years ago by Tim Triche, Jr. ▴ 10

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trio trio

12.7 years ago Javerjung Sandhu ▴ 200

4 results • Page 1 of 1

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Comment: Handling Epic Array Data by Melisa Tecik • 0

Thank you so much for the clarification. As you said the replicates are the cells from different plates. For instance, both R01C01 and R05C…

Answer: Handling Epic Array Data by James W. MacDonald 67k

You don't need a sample sheet. It is just a simple way to identify the Idat files and possibly include sample information. But you appear t…

Comment: preprocessIllumina error with EPICv2 array by Rakesh • 0

Amazing, thanks for the help!

Answer: Allele frequencies for ALL alleles of one SNP ? by Robert Castelo ★ 3.4k

Hi, the [GenomicScores](https://bioconductor.org/packages/GenomicSCores) package provides supporting infrastructure to create annotation re…

Answer: preprocessIllumina error with EPICv2 array by James W. MacDonald 67k

You shouldn't need to change the annotation, and certainly not like that. You should never need to use the `@` function directly - there ar…

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Answer: Using voom-transformed counts for unsupervised analyses (PCA, Random Forest, Ela

Answer: preprocessIllumina error with EPICv2 array

Answer: UniProt.ws query loading indefinitely

Answer: Package needs internet access

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