Bioconductor Wald

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973

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DESeq2 wald stat

updated 20 months ago by Peter Hickey ▴ 740 • written 20 months ago by eve.olszanowski • 0

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1.5k

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etLRT WALD edgeR DESEq

updated 2.8 years ago by Michael Love 42k • written 2.8 years ago by aiswaryabioinfo • 0

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714

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deseq2 LRT wald

updated 4.2 years ago by Kevin Blighe ★ 3.9k • written 4.2 years ago by jnaviapelaez ▴ 10

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1.0k

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GENESIS zscore wald

updated 4.6 years ago by Stephanie M. Gogarten ▴ 870 • written 4.6 years ago by lassana.a.samarakoon ▴ 10

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1.9k

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deseq2 LRT WALD

updated 4.8 years ago by Michael Love 42k • written 4.8 years ago by annesoalvarez • 0

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1.2k

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deseq2 ribosome profiling wald lrt

updated 5.4 years ago by Michael Love 42k • written 5.4 years ago by indrik.wijaya ▴ 20

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4.0k

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rnaseq deseq2 lrt wald differential gene expression

updated 2.1 years ago by krushnach80 • 0 • written 6.7 years ago by chrysanthi.taxiarchi12 • 0

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2.6k

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deseq2 wald lrt genes significance

updated 7.9 years ago by Michael Love 42k • written 7.9 years ago by aziza ▴ 20

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18k

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deseq2 wald

updated 2.5 years ago by Michael Love 42k • written 9.2 years ago by deena ▴ 20

9 results • Page 1 of 1

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Comment: Ensembl plants at annotationHub? by Daniele • 0

Dear Johannes, Would it be possible to create the EnsDb for Triticum aestivum (IWGSC)? Thank you very much, Daniele

Comment: How can I create a eigencorplot of pca created from deseq2 object with PCAtools by BioinfGuru ▴ 30

Figured it out with ?eigencorplot, thanks Michael. I was trying to pass 10 PCs when I only had 8, and I was including metadata columns that…

Answer: DECIPHER::idTaxa - broken link to download GTDB r220 (modified) trainig set by makala • 0

Thanks a lot!

Comment: DECIPHER::idTaxa - broken link to download GTDB r220 (modified) trainig set by Erik Wright ▴ 150

Thanks for notifying us of this broken link. It should be fixed on the Downloads page now. [1] [1]: http://www2.decipher.codes/Classificat…

Answer: Importing a GraphNEL into Cytoscape with RCy3 with error: "Error in cyrestPUT(pa by Matthew Thornton ▴ 360

So it turns out that if the count and the size are the same in 'GOstats", the odds ratio is 'inf'. These are causing the issue. Thank you!!

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Comment: How can I create a eigencorplot of pca created from deseq2 object with PCAtools

Answer: Importing a GraphNEL into Cytoscape with RCy3 with error: "Error in cyrestPUT(pa

Rsubread counting peaks ATACseq

Comment: Can DESeq2 rlog normalized matrix reflects time course result directly?

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