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wgcna package
•
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1
vote
0
replies
1.2k
views
WGCNA trait order in heat map
wgcna
WGCNA
wgcna package
5.1 years ago
coyoung
▴ 10
0
votes
2
replies
3.4k
views
Module preservation WGCNA
wgcna
wgcna package
modulepreservation
updated 6.2 years ago by
Peter Langfelder
★ 3.0k • written 6.2 years ago by
bekah
▴ 40
0
votes
1
reply
2.2k
views
WGCNA: Matching eigengenes to samples
wgcna
wgcna package
6.2 years ago
Jack
• 0
0
votes
2
replies
1.5k
views
Using Kendall's Tau rank correlation coefficient for creating WGCNA network
wgcna package
wgcna
6.3 years ago
anni.djurhuus
• 0
2
votes
3
replies
1.8k
views
Problem for finding "Locus Link ID" from Annotation file
wgcna package
TCGA
LocusLinkID
genecode
ensembl
updated 6.3 years ago by
James W. MacDonald
68k • written 6.3 years ago by
modarzi
▴ 10
0
votes
2
replies
3.7k
views
TOMplot error: "color" is not a graphical parameter (WGCNA)
wgcna package
software error
updated 6.4 years ago by
Peter Langfelder
★ 3.0k • written 6.4 years ago by
giuseppe0525
• 0
0
votes
0
replies
1.3k
views
consensus module relationship
wgcna
wgcna package
consensus
6.4 years ago
2323982403
▴ 60
2
votes
4
replies
1.8k
views
Segfault error when loading WGCNA
wgcna
wgcna package
6.4 years ago
antoinefelden
▴ 10
2
votes
2
replies
5.8k
views
WGCNA extract genes from a module
WGCNA
wgcna package
updated 6.5 years ago by
Peter Langfelder
★ 3.0k • written 6.5 years ago by
bdy8
▴ 10
1
vote
3
replies
1.6k
views
SampleNetwork in WGCNA
wgcna
wgcna package
6.5 years ago
2323982403
▴ 60
0
votes
0
replies
2.8k
views
Use of bicor in WGCNA
WGCNA
wgcna package
wgcna
bicor
6.5 years ago
bekah
▴ 40
12
votes
15
replies
20k
views
WGCNA: Understanding module-trait correlations
wgcna package
updated 6.6 years ago by
Peter Langfelder
★ 3.0k • written 6.6 years ago by
bekah
▴ 40
0
votes
0
replies
1.1k
views
problem for finding soft power for constructing network in WGCNA algorithm
RNA-seq
WGCNA package
soft power
6.6 years ago
modarzi
▴ 10
13 results • Page
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Recent ...
Replies
Comment: Overcoming confounding in batch effect correction
by
ATpoint
★ 4.7k
biostars.org and the [bioinformatics reddit][1] are suitable and have much larger audience than this forum here. [1]: https://www.reddi…
Comment: Overcoming confounding in batch effect correction
by
bbao
▴ 10
Thank you! And apologies for posting here. Do you know which forum I should go to in the future for questions like these?
Comment: For some reason I can't update BiocManager to 3.20
by
shepherl
4.1k
interesting. it could be since this is not your installation that it was installed by an admin that you do not have access to perform this…
Comment: Overcoming confounding in batch effect correction
by
ATpoint
★ 4.7k
Hi, this is not related to Bioconductor directly. And no, you cannot correct anything because in your own batch you only have a single samp…
Comment: MEDIPS - error using MEDIPS.CpGenrich
by
sg
• 0
I have the same error when I use 22 chrs with the paramenters chr.select: Error in h(simpleError(msg, call)) : error in evaluating the …
Votes
Answer: Store Matrix in DataFrame Cell
Answer: enrichGOgradient color change
Comment: Overcoming confounding in batch effect correction
Overcoming confounding in batch effect correction
Answer: Standardization of rlog transformed counts before PCA
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