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wgcna package
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1
vote
0
replies
955
views
WGCNA trait order in heat map
wgcna
WGCNA
wgcna package
4.3 years ago
coyoung
▴ 10
0
votes
2
replies
2.5k
views
Module preservation WGCNA
wgcna
wgcna package
modulepreservation
updated 5.4 years ago by
Peter Langfelder
★ 3.0k • written 5.4 years ago by
bekah
▴ 40
0
votes
1
reply
2.0k
views
WGCNA: Matching eigengenes to samples
wgcna
wgcna package
5.4 years ago
Jack
• 0
0
votes
2
replies
1.2k
views
Using Kendall's Tau rank correlation coefficient for creating WGCNA network
wgcna package
wgcna
5.5 years ago
anni.djurhuus
• 0
2
votes
3
replies
1.5k
views
Problem for finding "Locus Link ID" from Annotation file
wgcna package
TCGA
LocusLinkID
genecode
ensembl
updated 5.5 years ago by
James W. MacDonald
65k • written 5.6 years ago by
modarzi
▴ 10
0
votes
2
replies
3.2k
views
TOMplot error: "color" is not a graphical parameter (WGCNA)
wgcna package
software error
updated 5.6 years ago by
Peter Langfelder
★ 3.0k • written 5.6 years ago by
giuseppe0525
• 0
0
votes
0
replies
1.1k
views
consensus module relationship
wgcna
wgcna package
consensus
5.6 years ago
2323982403
▴ 60
2
votes
4
replies
1.5k
views
Segfault error when loading WGCNA
wgcna
wgcna package
5.7 years ago • updated 5.6 years ago
antoinefelden
▴ 10
2
votes
2
replies
4.9k
views
WGCNA extract genes from a module
WGCNA
wgcna package
updated 5.7 years ago by
Peter Langfelder
★ 3.0k • written 5.7 years ago by
bdy8
▴ 10
1
vote
3
replies
1.3k
views
SampleNetwork in WGCNA
wgcna
wgcna package
5.7 years ago
2323982403
▴ 60
0
votes
0
replies
2.4k
views
Use of bicor in WGCNA
WGCNA
wgcna package
wgcna
bicor
5.7 years ago
bekah
▴ 40
12
votes
15
replies
15k
views
WGCNA: Understanding module-trait correlations
wgcna package
updated 5.8 years ago by
Peter Langfelder
★ 3.0k • written 5.8 years ago by
bekah
▴ 40
0
votes
0
replies
841
views
problem for finding soft power for constructing network in WGCNA algorithm
RNA-seq
WGCNA package
soft power
5.8 years ago
modarzi
▴ 10
13 results • Page
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Answer: Method to find pathways different between 2 groups
by
Gordon Smyth
50k
> When I search camera limma on pubmed, I found 2 papers I am unclear what point you are trying to make. limma's camera method has been fo…
Comment: package goseq seems to be not available on the latest version of R
by
Gordon Smyth
50k
limma most certainly is available. It installs in R 4.4.0 and Bioc 3.19 for all platforms without any issues. It has not had any period of …
Comment: package goseq seems to be not available on the latest version of R
by
Patrycja
▴ 20
limma package also isn't available.Is there any information when these packages will be available?
Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package)
by
Michael Love
41k
Check the number of bootstrapped data per chromosome compared to the original, and then you can also look at its distribution. For this it'…
Comment: DNAString: Standard checksum function?
by
Henrik Bengtsson
★ 2.4k
For completeness: SEGUID v2 (https://www.seguid.org/), implemented in CRAN package **[seguid](https://cran.r-project.org/package=seguid)*…
Votes
Answer: Why does GSEA on edgeR results for randomized samples give highly significant p-
Handling multiple differential expression comparisons
Answer: fgsea significant result
Answer: fgsea significant result
package goseq seems to be not available on the latest version of R
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