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xps
•
reset
1
vote
34
replies
3.8k
views
how to check which probesets belong to which transcript?
xps
affymetrix microarrays
humangene2.0ST
micro array data
updated 8.1 years ago by
cstrato
★ 3.9k • written 8.1 years ago by
Biologist
▴ 110
6
votes
25
replies
3.2k
views
How to import normalized file (using xps) to limma for differential expressed genes?
xps
heatmap
limma
updated 8.1 years ago by
cstrato
★ 3.9k • written 8.1 years ago by
Biologist
▴ 110
4
votes
21
replies
3.4k
views
RMA normaliztion using XPS
normalization
xps
updated 9.0 years ago by
cstrato
★ 3.9k • written 9.1 years ago by
dhwani.dholakia
• 0
0
votes
13
replies
1.8k
views
Loading quantiles normalized root data in XPS
probe
affy
xps
probe
affy
xps
updated 12.3 years ago by
cstrato
★ 3.9k • written 12.3 years ago by
Paul Geeleher
★ 1.3k
0
votes
13
replies
2.8k
views
unable to load xps
xps
updated 8.7 years ago by
cstrato
★ 3.9k • written 8.7 years ago by
a.mohamed.11
• 0
0
votes
12
replies
1.7k
views
quantile robust and RMA in xps
Normalization
PROcess
xps
Normalization
PROcess
xps
updated 15.0 years ago by
cstrato
★ 3.9k • written 15.0 years ago by
Mayte Suarez-Farinas
▴ 510
0
votes
12
replies
1.6k
views
Xps package : errors and RMA difference with Partek GS
Normalization
probe
xps
Normalization
probe
xps
updated 15.1 years ago by
cstrato
★ 3.9k • written 15.1 years ago by
arnaud Le Cavorzin
▴ 110
2
votes
11
replies
2.4k
views
RNA degradation plot interpretation
xps
rnadegradationplot
interpretation
updated 8.1 years ago by
cstrato
★ 3.9k • written 8.2 years ago by
Biologist
▴ 110
0
votes
10
replies
1.6k
views
subset in XPS
Normalization
Biobase
xps
Normalization
Biobase
xps
updated 15.8 years ago by
cstrato
★ 3.9k • written 15.8 years ago by
Zhibin Lu
▴ 80
0
votes
10
replies
2.6k
views
Unable to load XPS package in R studio
xps
xps
updated 9.8 years ago by
cstrato
★ 3.9k • written 9.8 years ago by
Nhu Quynh T. Tran
▴ 80
0
votes
10
replies
2.0k
views
package xps
xps
xps
updated 11.8 years ago by
Dan Tenenbaum
★ 8.2k • written 11.8 years ago by
Steven
▴ 110
0
votes
9
replies
1.6k
views
xps Error in exonLevel(exonlevel, chiptype) : invalid argument exonlevel
ChipName
affy
xps
ChipName
affy
xps
updated 16.0 years ago by
cstrato
★ 3.9k • written 16.0 years ago by
Dick Beyer
★ 1.4k
0
votes
9
replies
2.0k
views
xps- not being able to load it
xps
xps
updated 11.1 years ago by
cstrato
★ 3.9k • written 11.1 years ago by
Andreia Fonseca
▴ 810
0
votes
9
replies
2.4k
views
using frma and brainarray cdf on exon arrays
cdf
affy
PROcess
oligo
xps
frma
cdf
affy
PROcess
oligo
xps
frma
updated 10.3 years ago by
Stephen Piccolo
▴ 590 • written 10.3 years ago by
Ty Thomson
▴ 100
6
votes
8
replies
2.3k
views
Gene level analysis of Affymetrix GeneChip Mouse Exon Arrays
affy
aroma.affymetrix
exon array
xps
oligo
6.8 years ago
Gordon Smyth
50k
0
votes
8
replies
1.4k
views
HuGene annotation and htmls
Annotation
convert
xps
Annotation
convert
xps
updated 15.1 years ago by
Marc Carlson
★ 7.2k • written 15.1 years ago by
Mayte Suarez-Farinas
▴ 510
0
votes
8
replies
1.9k
views
Unable to load xps
xps
xps
updated 10.7 years ago by
cstrato
★ 3.9k • written 10.7 years ago by
Guest User
★ 13k
0
votes
8
replies
1.3k
views
Affymetrix HG U295 support in BioC?
cdf
affy
xps
cdf
affy
xps
13.9 years ago
Sole Acha, Xavi
▴ 110
0
votes
8
replies
4.0k
views
error ReadAffy
Arabidopsis thaliana
cdf
affy
gcrma
PROcess
oligo
xps
Arabidopsis thaliana
cdf
affy
xps
updated 6.1 years ago by
joseph.a.white1
• 0 • written 10.2 years ago by
nooshin
▴ 300
2
votes
8
replies
2.2k
views
Cannot install xps package, Mac OS 10.11, R 3.3
xps
installation
updated 7.4 years ago by
cstrato
★ 3.9k • written 7.4 years ago by
Sophie Marion de Proce
• 0
0
votes
8
replies
1.4k
views
Can't normalize 300+ HuGene arrays in xps
xps
xps
updated 13.7 years ago by
cstrato
★ 3.9k • written 13.7 years ago by
Mike Walter
▴ 230
0
votes
7
replies
1.3k
views
Xps package : errors and RMA difference with Partek GS
Normalization
xps
Normalization
xps
updated 15.1 years ago by
cstrato
★ 3.9k • written 15.1 years ago by
arnaud Le Cavorzin
▴ 110
3
votes
7
replies
1.5k
views
To find Differential expressed exons using xps package
xps
exons
updated 8.1 years ago by
cstrato
★ 3.9k • written 8.1 years ago by
Biologist
▴ 110
0
votes
7
replies
1.4k
views
xps: root.profile on a asubset of the data
Cancer
xps
Cancer
xps
updated 13.7 years ago by
cstrato
★ 3.9k • written 13.7 years ago by
Daniel Brewer
★ 1.9k
9
votes
7
replies
1.4k
views
[xps] Problems building scheme for DroGene 1.1 ST arrays in xps
xps
updated 5.6 years ago by
cstrato
★ 3.9k • written 5.6 years ago by
christopher.kimber
• 0
0
votes
6
replies
1.3k
views
xps - creating ROOT scheme fi les
Annotation
cdf
xps
Annotation
cdf
xps
updated 13.9 years ago by
cstrato
★ 3.9k • written 13.9 years ago by
John Coulthard
▴ 170
0
votes
6
replies
1.6k
views
Xps configuration error on Ubuntu 16.04 despite root being installed
root
xps
TParallelCoord.h
updated 6.9 years ago by
cstrato
★ 3.9k • written 6.9 years ago by
anou
▴ 10
0
votes
6
replies
1.6k
views
Create affyBatch from mouse exon array data using ReadAffy or extractAffyBatch() from aroma.affymetrix
cdf
exonmap
xps
cdf
exonmap
xps
updated 15.8 years ago by
cstrato
★ 3.9k • written 15.8 years ago by
De Bondt, An-7114 [PRDBE]
▴ 190
0
votes
5
replies
2.3k
views
HuGene-1_0-st-v1.r4.pgf
Annotation
xps
Annotation
xps
updated 15.1 years ago by
cstrato
★ 3.9k • written 15.1 years ago by
Mayte Suarez-Farinas
▴ 510
2
votes
5
replies
1.8k
views
[XPS]Installation of xps package in macOS Sierra
xps
package installation
updated 7.2 years ago by
Martin Morgan
25k • written 7.2 years ago by
snj
• 0
0
votes
5
replies
1.7k
views
xps package - import.expr.scheme help
xps
root
R
affy
updated 7.3 years ago by
cstrato
★ 3.9k • written 7.3 years ago by
jordansquair
• 0
1
vote
5
replies
1.6k
views
Error: Number of PMs or MMs is zero (xps package)
rlm
plm
rnadegradationplot
xps
updated 8.2 years ago by
cstrato
★ 3.9k • written 8.2 years ago by
Biologist
▴ 110
0
votes
5
replies
1.3k
views
Package "xps" import.data error
xps
xps
updated 15.2 years ago by
cstrato
★ 3.9k • written 15.2 years ago by
Wang, Yonghong NIH/NCI
▴ 60
0
votes
5
replies
1.1k
views
xps rma() with HuGene-1_0-st-v1 on 64-bit architecture
Annotation
Preprocessing
probe
oligo
xps
Annotation
Preprocessing
probe
oligo
xps
updated 15.2 years ago by
cstrato
★ 3.9k • written 15.2 years ago by
Tim Rayner
▴ 270
0
votes
5
replies
3.2k
views
Problem with xps package and root installation
xps
root
updated 9.0 years ago by
cstrato
★ 3.9k • written 9.0 years ago by
Mari RM
• 0
0
votes
5
replies
1.2k
views
installing xps
xps
xps
updated 15.4 years ago by
cstrato
★ 3.9k • written 15.4 years ago by
Lana Schaffer
★ 1.3k
1
vote
4
replies
3.8k
views
Detection Above Background (DABG) on Gene Level for Exon and Gene Arrays
probe
xps
probe
xps
updated 13.6 years ago by
cstrato
★ 3.9k • written 13.6 years ago by
Pascal Gellert
▴ 80
0
votes
4
replies
1.3k
views
xps - number of probesets for HuGene10ST array
Microarray
Normalization
xps
Microarray
Normalization
xps
15.0 years ago
Michael Walter
▴ 160
0
votes
4
replies
2.1k
views
LoadLibrary failures when loading RMySQL and xps packages
xps
xps
15.8 years ago
Marie Chehani Alles
▴ 40
0
votes
4
replies
1.0k
views
Probe-level analysis of exon arrays using xps
probe
xps
probe
xps
updated 12.7 years ago by
cstrato
★ 3.9k • written 12.7 years ago by
Lavorgna Giovanni
▴ 80
0
votes
4
replies
1.5k
views
Problem with xps package installation on Mac platform
xps
xps
updated 14.2 years ago by
steve shen
▴ 50 • written 14.2 years ago by
cstrato
★ 3.9k
0
votes
4
replies
1.3k
views
xps: hugene11 chip gives problems
Microarray
Annotation
xps
Microarray
Annotation
xps
updated 11.3 years ago by
cstrato
★ 3.9k • written 11.3 years ago by
Groot, Philip de
▴ 630
0
votes
4
replies
1.6k
views
R: R: Probe-level analysis of exon arrays using xps
Annotation
Normalization
Breast
Prostate
probe
Category
xps
Annotation
Normalization
xps
updated 12.7 years ago by
cstrato
★ 3.9k • written 12.7 years ago by
Lavorgna Giovanni
▴ 80
0
votes
4
replies
1.4k
views
error in import.exon.scheme, XPS package
xps
import.exon.scheme
error
rnadegradationplot
8.2 years ago
Biologist
▴ 110
0
votes
4
replies
1.1k
views
[XPS] integrating data processed outside of XPS into the tree
PROcess
xps
frma
PROcess
xps
frma
updated 12.6 years ago by
cstrato
★ 3.9k • written 12.6 years ago by
thomas sierocinski
▴ 50
0
votes
4
replies
1.1k
views
Affy ST 1.0 gene chip background probes cut off set up
affy
PROcess
xps
affy
PROcess
xps
updated 13.7 years ago by
cstrato
★ 3.9k • written 13.7 years ago by
Stacy_Xu@bd.com
▴ 40
0
votes
4
replies
1.6k
views
error with makecdfenv package
Annotation
cdf
makecdfenv
oligo
xps
Annotation
cdf
makecdfenv
oligo
xps
updated 9.8 years ago by
cstrato
★ 3.9k • written 9.8 years ago by
James W. MacDonald
65k
1
vote
3
replies
1.7k
views
Problem installing XPS
xps
r
updated 9.1 years ago by
cstrato
★ 3.9k • written 9.1 years ago by
dhwani.dholakia
• 0
0
votes
3
replies
1.3k
views
package xps: export.filter issues
Annotation
probe
xps
Annotation
probe
xps
updated 11.7 years ago by
cstrato
★ 3.9k • written 11.7 years ago by
steven wink
▴ 90
0
votes
3
replies
1.3k
views
XPS crashes
PROcess
xps
PROcess
xps
12.9 years ago
Clara Pons
▴ 30
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