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Comment: Comment: velociraptor preparation
3.9 years ago Pietro ▴ 40
2
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2
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1.7k
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velociraptor preparation
SingleCellExperiment singlecell velociraptor scvelo
updated 3.9 years ago by ★ 5.0k • written 3.9 years ago by ▴ 40
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Comment: C: Remove batch effect limma, "Coefficients not estimable" warning and design matri
5.2 years ago Pietro ▴ 40
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Comment: C: Remove batch effect limma, "Coefficients not estimable" warning and design matri
5.2 years ago Pietro ▴ 40
2
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8
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5.9k
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Remove batch effect limma, "Coefficients not estimable" warning and design matrix
limma deseq2 batch design batch effect
5.2 years ago Pietro ▴ 40
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5.9k
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Comment: C: Remove batch effect limma, "Coefficients not estimable" warning and design matri
5.2 years ago Pietro ▴ 40
0
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1
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2.0k
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Comment: C: Experimental design RNAseq differential expression
6.6 years ago • updated 5.7 years ago Pietro ▴ 40
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2.0k
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Comment: C: All genes display positive fold change in topTable results after limma
5.7 years ago Pietro ▴ 40
4
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5
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2.0k
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All genes display positive fold change in topTable results after limma
limma microarray foldchange DEG GEO
updated 5.7 years ago by 53k • written 5.7 years ago by ▴ 40
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2.0k
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Comment: C: All genes display positive fold change in topTable results after limma
5.7 years ago Pietro ▴ 40
0
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1
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2.0k
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Comment: C: Experimental design RNAseq differential expression
6.6 years ago Pietro ▴ 40
3
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5
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2.0k
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Experimental design RNAseq differential expression
edger limma design contrasts batch
updated 6.6 years ago by ★ 29k • written 6.6 years ago by ▴ 40
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0
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3.7k
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Comment: C: Are singscore scores comparable between gene sets?
6.6 years ago Pietro ▴ 40
2
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4
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3.7k
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Are singscore scores comparable between gene sets?
singscore GSVA GSEA subtypes geneset
updated 4.8 years ago by • 0 • written 6.7 years ago by ▴ 40
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0
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1.5k
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Tumor subtype classification when genes of gene set are missing from samples - GSVA approach
GSVA geneset RNASeq TCGA subtypes
6.8 years ago Pietro ▴ 40
5
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4
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1.8k
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Experiment design contrasts any time edgeR
DGE rnaseq RNA edger
updated 8.5 years ago by • 0 • written 8.5 years ago by ▴ 40
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1
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1.8k
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Comment: C: Experiment design contrasts any time edgeR
8.5 years ago Pietro ▴ 40
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