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Comment: C: Duplication of same sample as if two different samples
5.6 years ago A ▴ 40
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1
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762
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Comment: C: Duplication of same sample as if two different samples
5.6 years ago A ▴ 40
0
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1
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762
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Comment: C: Duplication of same sample as if two different samples
5.6 years ago A ▴ 40
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8
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762
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Duplication of same sample as if two different samples
deseq2
updated 5.6 years ago by 42k • written 5.6 years ago by ▴ 40
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0
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1.5k
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Comment: C: venDiagram after limma showing more genes after specifying up or down regulated
5.9 years ago A ▴ 40
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1
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1.5k
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Comment: C: venDiagram after limma showing more genes after specifying up or down regulated
5.9 years ago A ▴ 40
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4
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1.5k
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venDiagram after limma showing more genes after specifying up or down regulated specifically
venn diagram venndiagram limma microarray differential expression
updated 5.9 years ago by 65k • written 5.9 years ago by ▴ 40
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1.3k
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Comment: C: DEXSeq time course design
5.9 years ago A ▴ 40
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1
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1.3k
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Comment: C: DEXSeq time course design
5.9 years ago A ▴ 40
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1
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1.3k
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Comment: C: DEXSeq time course design
5.9 years ago A ▴ 40
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5
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1.3k
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DEXSeq time course design
DEXSeq differential exon usage
updated 5.9 years ago by ★ 1.9k • written 5.9 years ago by ▴ 40
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1
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1.0k
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Comment: C: Results counts post DESeq same raw counts
6.1 years ago A ▴ 40
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3
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1.0k
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Results counts post DESeq same raw counts
DESeq2 results
updated 6.1 years ago by 42k • written 6.1 years ago by ▴ 40
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0
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972
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Metadata sheet for DEXSeq analysis
dexseq differential isoform usage isoforms summarizeoverlaps granges
6.1 years ago A ▴ 40
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0
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905
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Comment: C: Interpretation of results names after LRT
6.2 years ago A ▴ 40
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2
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905
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Interpretation of results names after LRT
DESeq2 LRT multiple time points
updated 6.2 years ago by 42k • written 6.2 years ago by ▴ 40
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1
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1.3k
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Comment: C: Error in DESeq "object" not found
6.2 years ago A ▴ 40
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3
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1.3k
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Error in DESeq "object" not found
deseq2 LRT reduced model
updated 6.2 years ago by 65k • written 6.2 years ago by ▴ 40
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0
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1.2k
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Comment: C: Filtering genes with a minimum number of counts between samples
6.3 years ago A ▴ 40
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2
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1.2k
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Filtering genes with a minimum number of counts between samples
DESeq2 filtering
updated 6.3 years ago by 42k • written 6.3 years ago by ▴ 40
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0
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1.4k
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Comment: C: Filtering for genes >100 counts after LRT still showing significant genes with g
6.3 years ago A ▴ 40
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1
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1.4k
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Comment: C: Filtering for genes >100 counts after LRT still showing significant genes with g
6.3 years ago A ▴ 40
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1
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1.4k
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Comment: C: Filtering for genes >100 counts after LRT still showing significant genes with g
6.3 years ago A ▴ 40
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8
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1.4k
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Filtering for genes >100 counts after LRT still showing significant genes with genes with 0 counts!
LRT CPM lowcountgenes deseq2
6.3 years ago A ▴ 40
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1
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1.4k
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Comment: A: Filtering for genes >100 counts after LRT still showing significant genes with g
6.3 years ago A ▴ 40
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0
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3.3k
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Comment: C: DESeq2 nbinomLRT results interpretation
6.3 years ago A ▴ 40
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1
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3.3k
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Comment: C: DESeq2 nbinomLRT results interpretation
6.3 years ago A ▴ 40
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1
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3.3k
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Comment: C: DESeq2 nbinomLRT results interpretation
6.3 years ago A ▴ 40
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1
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3.3k
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Comment: C: DESeq2 nbinomLRT results interpretation
6.3 years ago A ▴ 40
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1
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3.3k
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Comment: C: DESeq2 nbinomLRT results interpretation
6.3 years ago A ▴ 40
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0
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1.7k
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Comment: C: Problem converting first column to rownames
6.3 years ago A ▴ 40
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1
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1.7k
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Comment: C: Problem converting first column to rownames
6.3 years ago A ▴ 40
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4
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1.7k
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Problem converting first column to rownames
deseq2 countdata
updated 6.3 years ago by 42k • written 6.3 years ago by ▴ 40
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0
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887
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Comment: C: DESeq2, no significantly DE genes
6.3 years ago A ▴ 40
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2
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887
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DESeq2, no significantly DE genes
deseq2 differential expression adjusted pvalue
updated 6.3 years ago by 42k • written 6.3 years ago by ▴ 40
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0
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2.0k
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Comment: C: Differential expression between multiple groups
6.5 years ago A ▴ 40
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2
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2.0k
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Differential expression between multiple groups
multiple groups differential gene expression microarray
6.5 years ago A ▴ 40
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0
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14k
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Comment: C: GeneList issue ClusterProfiler
6.5 years ago A ▴ 40
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1
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14k
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Comment: C: GeneList issue ClusterProfiler
6.5 years ago A ▴ 40
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1
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14k
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Comment: C: GeneList issue ClusterProfiler
6.5 years ago A ▴ 40
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0
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1.3k
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Comment: C: Subsetting GSE data with information from two different slots
6.5 years ago A ▴ 40
1
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2
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1.3k
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Subsetting GSE data with information from two different slots
GSE subsetting microarray
updated 6.5 years ago by ★ 1.0k • written 6.5 years ago by ▴ 40
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