Bioconductor CPM

5

votes

7

replies

246

views

filtering RNA-Seq CPM edgeR filterByExpr

updated 3 days ago by Gordon Smyth 47k • written 4 days ago by mohammedtoufiq91 ▴ 10

3

votes

9

replies

446

views

CPM filterByExpr edgeR design model.matrix

9 weeks ago • updated 8 weeks ago mohammedtoufiq91 ▴ 10

5

votes

6

replies

639

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CPM filterByExpr edgeR histogram rowsums

5 months ago mohammedtoufiq91 ▴ 10

2

votes

7

replies

852

views

RUVSeq CPM Normalization

12 months ago Jess • 0

1

vote

1

reply

628

views

DEGUST Normalization CPM

updated 20 months ago by James W. MacDonald 62k • written 20 months ago by Caroline • 0

0

votes

2

replies

2.3k

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edger cpm rnaseq

2.8 years ago francesca3 • 0

0

votes

3

replies

421

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RNA seq cpm

updated 3.1 years ago by Kevin Blighe 3.8k • written 3.1 years ago by isabel.pieterse • 0

3

votes

2

replies

475

views

diffbind CPM TMM

updated 3.2 years ago by Rory Stark ★ 4.8k • written 3.2 years ago by Guandong Shang ▴ 40

4

votes

5

replies

665

views

deseq2 vst pca cpm

3.3 years ago svlachavas ▴ 810

1

vote

2

replies

513

views

rlog CPM RKPM

updated 3.5 years ago by Steve Lianoglou 13k • written 3.5 years ago by zhang.jianhai ▴ 10

5

votes

7

replies

1.8k

views

edger removeBatchEffect cpm logCPM limma

4.0 years ago altintas.ali • 0

3

votes

2

replies

712

views

edger limma cpm

updated 4.6 years ago by Aaron Lun ★ 28k • written 4.6 years ago by b.nota ▴ 360

2

votes

4

replies

858

views

edger cpm non-specific filtering rnaseq

updated 4.9 years ago by Gordon Smyth 47k • written 4.9 years ago by svlachavas ▴ 810

15

votes

6

replies

24k

views

edgeR cpm

updated 5.0 years ago by ftroot1010 ▴ 20 • written 5.2 years ago by jxb.dev ▴ 40

6

votes

14

replies

2.3k

views

rnaseq analysis variancestabilizingtransformation normalization cpm edger

updated 5.0 years ago by Wolfgang Huber 13k • written 5.1 years ago by svlachavas ▴ 810

6

votes

2

replies

2.1k

views

edger cpm

updated 5.2 years ago by Aaron Lun ★ 28k • written 5.2 years ago by b.nota ▴ 360

3

votes

8

replies

937

views

LRT CPM lowcountgenes deseq2

5.3 years ago A ▴ 40

0

votes

3

replies

784

views

edgeR cpm edger fitted model explained variance

updated 5.3 years ago by Gordon Smyth 47k • written 5.3 years ago by alakatos ▴ 120

4

votes

11

replies

3.6k

views

edger independent filtering multiple factor design cpm

updated 5.6 years ago by Gordon Smyth 47k • written 5.6 years ago by teshome.dagnem • 0

3

votes

9

replies

1.2k

views

edger cpm

5.6 years ago jtremblay514 • 0

2

votes

7

replies

4.6k

views

cpm gene expression matrix tmm normailzation

6.3 years ago kkadzi25 • 0

1

vote

2

replies

1.8k

views

edger filtering cpm

updated 6.7 years ago by Gordon Smyth 47k • written 6.7 years ago by lynski008 • 0

2

votes

7

replies

1.9k

views

edgeR DE analysis fold change cpm

updated 6.8 years ago by Ryan C. Thompson 7.8k • written 6.8 years ago by Sara ▴ 10

1

vote

6

replies

1.4k

views

limma cpm

updated 6.9 years ago by José Luis Lavín ▴ 10 • written 7.2 years ago by map2085 ▴ 40

1

vote

3

replies

1.9k

views

deseq2 rnaseq rna-seq normalization cpm

updated 7.1 years ago by Wolfgang Huber 13k • written 7.1 years ago by stwestreich • 0

5

votes

4

replies

6.7k

views

edger cpm multiple factor design independent filtering

7.4 years ago dietahanson ▴ 30

11

votes

3

replies

2.9k

views

edger cpm

7.4 years ago mikaelhc ▴ 10

5

votes

3

replies

1.3k

views

edgeR cpm voom limma

7.7 years ago Ryan C. Thompson 7.8k

0

votes

3

replies

3.1k

views

CPM edgeR

8.0 years ago ycding ▴ 10