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Comment: Conversion from FPKM,RPKM to tpm
by
Michael Love
34k
Multiplication. It's just making the FPKM for a sample sum to 1e6 over genes. But this is also not part of the scope of DESeq2. You can try…
Comment: Conversion from FPKM,RPKM to tpm
by
Sandhiya
•
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@mikelove - Can you please suggest some right tools to be used for the fpkm to tpm conversion..
Answer: Conversion from FPKM,RPKM to tpm
by
Michael Love
34k
You won't be able to make a DESeqDataSet without the count data. If you just have FPKM/TPM this is going to be hard for you.
You can con…
Answer: Interpretation of DESeq2 results with 3 factorial design with interaction terms.
by
swbarnes2
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850
I think the simplest way to do your first question is to make a new column that joins sex and load, make your design sex_load + age, and th…
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