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Made a pDATA manually for HTqPCR procedure
HTqPCR phenoData esetVis pData
4.2 years ago Marcelo Laia ▴ 450
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688
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Use limma to a non-genomic data
non-genomic quantitative limma
4.6 years ago Marcelo Laia ▴ 450
3
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3
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1.4k
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AnnotationForge run by three days and do not end
annotation AnnotationForge
5.7 years ago Marcelo Laia ▴ 450
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1.4k
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Answer: A: AnnotationForge run by three days and do not end
5.7 years ago Marcelo Laia ▴ 450
0
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1
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1.5k
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limma technical replicates and biological replicates in the same design
limma SANTA limma SANTA
updated 6.5 years ago by 53k • written 16.3 years ago by ▴ 450
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1.3k
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Is possible to use NOISeq with counts from RSubread?
noiseq rsubread tophat bowtie bowtie2
6.6 years ago Marcelo Laia ▴ 450
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1.7k
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Clustering large dataset
HeatMap Cairo Graphics Device Failed to create Cairo backend seqplots
updated 6.8 years ago by 4.2k • written 6.8 years ago by ▴ 450
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2
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2.1k
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qRT-PCR Sample Maximization software analysis and proper experimental design advice
qPCR Sample Maximization Analysis Experimental Design qRT-PCR
updated 10.7 years ago by 53k • written 10.7 years ago by ▴ 450
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2.1k
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Comment: A: qRT-PCR Sample Maximization software analysis and proper experimental design adv
10.7 years ago Marcelo Laia ▴ 450
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1.5k
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Comment: C: timecourse package - Missing data
15.9 years ago Marcelo Laia ▴ 450
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2
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1.5k
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timecourse package - Missing data
TimeCourse timecourse TimeCourse timecourse
updated 15.9 years ago by ▴ 440 • written 15.9 years ago by ▴ 450
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1
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3.6k
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Answer: A: problems in installing biomart
16.1 years ago Marcelo Laia ▴ 450
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1
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2.6k
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Comment: C: Most stable gene pairs in array experiment
16.2 years ago Marcelo Laia ▴ 450
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0
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1.1k
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OFF TOPIC high-density SSU rRNA microarray
Microarray SANTA Microarray SANTA
16.3 years ago Marcelo Laia ▴ 450
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0
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1.2k
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[limma] Possible bug on read.maimages function ?
Annotation limma SANTA Annotation limma SANTA
16.3 years ago Marcelo Laia ▴ 450
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1.7k
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limma Time Course Experiments question
graph limma SANTA graph limma SANTA
16.8 years ago Marcelo Laia ▴ 450
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0
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1.3k
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Answer: A: No degree of freedom in maanova
16.8 years ago Marcelo Laia ▴ 450
0
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1
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1.3k
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No degree of freedom in maanova
maanova maanova
16.8 years ago Marcelo Laia ▴ 450
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0
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2.2k
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Comment: C: Normalization of bi-modal expression data
16.9 years ago Marcelo Laia ▴ 450
0
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1
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1.4k
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Answer: A: Maanova & createdata
17.1 years ago Marcelo Laia ▴ 450
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0
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957
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OFF TOPIC How did we control for or remove background hybridization to the vector backbone ?
Normalization limma Normalization limma
17.2 years ago Marcelo Laia ▴ 450
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0
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755
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Categories microarray data in functional profiles
Microarray Annotation GO Category Microarray Annotation GO Category
17.5 years ago Marcelo Laia ▴ 450
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1
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1.0k
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Answer: A: Single channel (numerical intensities) data import into BioConductor
17.7 years ago Marcelo Laia ▴ 450
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0
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859
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Question about Error in next.fix:(next.fix + ncols - 1) : NA/NaN argument
Genetics Genetics
17.7 years ago Marcelo Laia ▴ 450
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0
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1.7k
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Answer: A: MAANOVA - Error in dimnames(x) <- dn : length of 'dimnames' [1] not equal to arr
17.7 years ago Marcelo Laia ▴ 450
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0
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1.2k
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Answer: A: MAANOVA - how to collapse replicate spots
17.7 years ago Marcelo Laia ▴ 450
0
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0
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1.2k
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Comment: C: Limma: How to set title for imageplot, plotPrintTipLoess and plotDensities ?
17.7 years ago Marcelo Laia ▴ 450
0
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1
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1.2k
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Answer: A: Limma: How to set title for imageplot, plotPrintTipLoess and plotDensities ?
17.7 years ago Marcelo Laia ▴ 450
0
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0
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1.3k
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limma Factorial 2x2x2x4 : Did I a correct parametrization ?
limma limma
17.8 years ago Marcelo Laia ▴ 450
0
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1
reply
1.7k
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maSigPro Problems in see.genes
updated 17.9 years ago by ▴ 340 • written 17.9 years ago by ▴ 450
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0
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1.1k
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[SOLVED] Factorial experiment: No degree of freedom in maanova
maanova maanova
17.9 years ago Marcelo Laia ▴ 450
0
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0
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1.5k
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Comment: C: Factorial experiment: No degree of freedom in maanova
17.9 years ago Marcelo Laia ▴ 450
0
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1
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1.5k
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Comment: C: Factorial experiment: No degree of freedom in maanova
17.9 years ago Marcelo Laia ▴ 450
0
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1
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1.5k
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Answer: A: Factorial experiment: No degree of freedom in maanova
17.9 years ago Marcelo Laia ▴ 450
0
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0
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982
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Factorial experiment: No degree of freedom in maanova
maanova maanova
17.9 years ago Marcelo Laia ▴ 450
0
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0
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757
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Help on basic skills on R and maanova
18.4 years ago Marcelo Laia ▴ 450
0
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1
reply
1.2k
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Needed help on maanova fitmaanova function
affy vsn limma maanova affyio affy vsn limma maanova affyio
18.4 years ago Marcelo Laia ▴ 450
0
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0
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1.2k
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Answer: A: Needed help on maanova fitmaanova function
18.4 years ago Marcelo Laia ▴ 450
0
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1
reply
1.7k
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Comment: C: Extract M values from probes set to cluster
18.9 years ago Marcelo Laia ▴ 450
0
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0
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1.7k
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Comment: C: Extract M values from probes set to cluster
18.9 years ago Marcelo Laia ▴ 450
0
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2
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1.7k
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Comment: C: Extract M values from probes set to cluster
18.9 years ago Marcelo Laia ▴ 450
0
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7
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1.7k
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Extract M values from probes set to cluster
updated 18.9 years ago by 21k • written 18.9 years ago by ▴ 450
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4
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1.8k
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cluster a set of genes based on another set of genes
Organism limma Organism limma
updated 18.9 years ago by ▴ 280 • written 18.9 years ago by ▴ 450
0
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0
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1.5k
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Answer: A: Time course cDNA two color array analysis
18.9 years ago Marcelo Laia ▴ 450
0
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2
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1.5k
views
Time course cDNA two color array analysis
TimeCourse limma timecourse maSigPro TimeCourse limma timecourse maSigPro
19.0 years ago • updated 18.9 years ago Marcelo Laia ▴ 450
0
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1
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1.0k
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Spot duplicate in timecourse package and "missing" values
TimeCourse limma timecourse TimeCourse limma timecourse
updated 18.9 years ago by ▴ 440 • written 18.9 years ago by ▴ 450
0
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2
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886
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help in normalization cDNA arrays
updated 18.9 years ago by ★ 1.9k • written 18.9 years ago by ▴ 450
0
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0
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864
views
[limma] Error: nestedF method can't handle NA p-values
18.9 years ago Marcelo Laia ▴ 450
0
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0
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1.1k
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Advice on how to compare two different sources on cDNA
limma weaver limma weaver
18.9 years ago Marcelo Laia ▴ 450
0
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0
replies
2.2k
views
Comment: C: Rgraphviz problem
19.0 years ago Marcelo Laia ▴ 450
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