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0
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1
reply
292
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Comment: Comment: DESeq2: Repetitive padj values?
10 weeks ago vanbelj ▴ 20
0
votes
1
reply
292
views
Comment: Comment: DESeq2: Repetitive padj values?
10 weeks ago vanbelj ▴ 20
0
votes
1
reply
292
views
Comment: Comment: DESeq2: Repetitive padj values?
10 weeks ago vanbelj ▴ 20
4
votes
7
replies
292
views
DESeq2: Repetitive padj values?
DESeq2
updated 9 weeks ago by 39k • written 10 weeks ago by ▴ 20
0
votes
0
replies
291
views
Comment: Comment: ChIP-Seq Analysis: Comparing Unannotated Peaks with DESeq2
3 months ago vanbelj ▴ 20
0
votes
2
replies
291
views
ChIP-Seq Analysis: Comparing Unannotated Peaks with DESeq2
DESeq2 MACS2
4 months ago • updated 3 months ago vanbelj ▴ 20
2
votes
6
replies
801
views
DESeq2: relevel() unsuccessfully setting control group
DESeq2
updated 9 months ago by • 0 • written 2.0 years ago by ▴ 20
3
votes
4
replies
547
views
DESeq2: Extracting Averaged Counts Information from dds and rld
DESeq2
10 months ago vanbelj ▴ 20
1
vote
0
replies
547
views
Answer: Answer: DESeq2: Extracting Averaged Counts Information from dds and rld
10 months ago vanbelj ▴ 20
0
votes
1
reply
547
views
Comment: Comment: DESeq2: Extracting Averaged Counts Information from dds and rld
10 months ago vanbelj ▴ 20
1
vote
2
replies
571
views
Extracting Score/Coverage From GRange Object
IRanges rtracklayer GenomicRanges
11 months ago vanbelj ▴ 20
1
vote
0
replies
571
views
Answer: Answer: Extracting Score/Coverage From GRange Object
11 months ago vanbelj ▴ 20
0
votes
0
replies
571
views
Comment: Comment: Extracting Score/Coverage From GRange Object
11 months ago vanbelj ▴ 20
1
vote
1
reply
345
views
DESeq2 With Ratios from Nascent RNA-seq (Conversion Rate from slamdunk)
DESeq2
updated 12 months ago by 39k • written 12 months ago by ▴ 20
0
votes
1
reply
745
views
Comment: Comment: DESeq2: Subset Results from 2-Factor Design
12 months ago vanbelj ▴ 20
0
votes
1
reply
745
views
Comment: Comment: DESeq2: Subset Results from 2-Factor Design
13 months ago vanbelj ▴ 20
0
votes
1
reply
745
views
Comment: Comment: DESeq2: Subset Results from 2-Factor Design
13 months ago vanbelj ▴ 20
3
votes
7
replies
745
views
DESeq2: Subset Results from 2-Factor Design
DESeq2
updated 12 months ago by 39k • written 13 months ago by ▴ 20
0
votes
1
reply
548
views
ComplexHeatmap: setting column_order changes plotted values
ComplexHeatmap
2.0 years ago vanbelj ▴ 20
0
votes
0
replies
548
views
Answer: Answer: ComplexHeatmap: setting column_order changes plotted values
2.0 years ago vanbelj ▴ 20
0
votes
1
reply
422
views
Metagene Analysis in R - Best Options?
metagene2
2.0 years ago vanbelj ▴ 20
0
votes
0
replies
422
views
Answer: Answer: Metagene Analysis in R - Best Options?
2.0 years ago vanbelj ▴ 20
0
votes
0
replies
585
views
Comment: Comment: metage problem with DESeq
2.0 years ago vanbelj ▴ 20
0
votes
0
replies
801
views
Comment: Comment: DESeq2: relevel() unsuccessfully setting control group
2.0 years ago vanbelj ▴ 20
0
votes
1
reply
801
views
Comment: Comment: DESeq2: relevel() unsuccessfully setting control group
2.0 years ago vanbelj ▴ 20
0
votes
1
reply
20k
views
Comment: Comment: DESeq2 / PCA Analysis of RNA-seq Data - Best Explanatory Resource?
2.1 years ago vanbelj ▴ 20
0
votes
1
reply
20k
views
Comment: Comment: DESeq2 / PCA Analysis of RNA-seq Data - Best Explanatory Resource?
2.1 years ago vanbelj ▴ 20
9
votes
6
replies
20k
views
DESeq2 / PCA Analysis of RNA-seq Data - Best Explanatory Resource?
DESeq2 pcaExplorer
updated 2.1 years ago by 39k • written 2.1 years ago by ▴ 20
0
votes
1
reply
1.1k
views
Comment: Comment: Subtracting Background Signal Before DESeq Analysis
2.1 years ago vanbelj ▴ 20
0
votes
1
reply
1.1k
views
Comment: Comment: Subtracting Background Signal Before DESeq Analysis
2.1 years ago vanbelj ▴ 20
0
votes
7
replies
1.1k
views
Subtracting Background Signal Before DESeq Analysis
Salmon DESeq2
updated 22 months ago by 39k • written 2.1 years ago by ▴ 20
2
votes
3
replies
963
views
Gene Ontology Analysis of DE Genes
clusterProfiler AnnotationDbi OrgDb goseq
updated 2.2 years ago by 62k • written 2.2 years ago by ▴ 20
0
votes
0
replies
963
views
Comment: Comment: Gene Ontology Analysis of DE Genes
2.2 years ago vanbelj ▴ 20
0
votes
1
reply
1.1k
views
Comment: Comment: DESeq2: Significant padj and LFC in a 0 vs. 20 counts comparison?
2.2 years ago vanbelj ▴ 20
0
votes
1
reply
1.1k
views
Comment: Comment: DESeq2: Significant padj and LFC in a 0 vs. 20 counts comparison?
2.2 years ago vanbelj ▴ 20
4
votes
14
replies
1.1k
views
DESeq2: Significant padj and LFC in a 0 vs. 20 counts comparison?
DESeq2
updated 2.1 years ago by • 0 • written 2.2 years ago by ▴ 20
0
votes
1
reply
4.0k
views
Comment: Comment: DESeq2: Multiple Comparisons with Different Conditions and Replicates
2.2 years ago vanbelj ▴ 20
2
votes
3
replies
4.0k
views
DESeq2: Multiple Comparisons with Different Conditions and Replicates
Interactions DESeq2 Design
updated 2.2 years ago by 3.8k • written 2.2 years ago by ▴ 20
0
votes
1
reply
951
views
Comment: C: GRanges/GFeatures: Retain all parent columns in cdsByOverlaps output
2.6 years ago vanbelj ▴ 20
0
votes
1
reply
951
views
Comment: C: GRanges/GFeatures: Retain all parent columns in cdsByOverlaps output
2.6 years ago vanbelj ▴ 20
0
votes
1
reply
951
views
Comment: C: GRanges/GFeatures: Retain all parent columns in cdsByOverlaps output
2.6 years ago vanbelj ▴ 20
3
votes
7
replies
951
views
GRanges/GFeatures: Retain all parent columns in cdsByOverlaps output
GRanges GenomicRanges GenomicFeatures cdsByOverlaps DiffBind
updated 2.6 years ago by 62k • written 2.6 years ago by ▴ 20
0
votes
0
replies
566
views
Comment: C: GenomicFeatures promotersByOverlap: Identify promoters by overlap?
3.2 years ago vanbelj ▴ 20
2
votes
3
replies
566
views
GenomicFeatures promotersByOverlap: Identify promoters by overlap?
GenomicFeatures GenomicRanges
updated 3.2 years ago by 62k • written 3.2 years ago by ▴ 20
0
votes
0
replies
947
views
Comment: C: csaw: Error in path.expand(bam.file) : invalid 'path' argument
3.7 years ago vanbelj ▴ 20
6
votes
2
replies
947
views
csaw: Error in path.expand(bam.file) : invalid 'path' argument
csaw software error
updated 3.7 years ago by 25k • written 3.7 years ago by ▴ 20
46 results • Page 1 of 1
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