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6
votes
4
replies
3.8k
views
the coordinates of exons of RefSeq or ENSEMBL genes
txdb genome exons
updated 6.4 years ago by 25k • written 6.4 years ago by ▴ 670
0
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0
replies
3.8k
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Comment: C: the coordinates of exons of RefSeq or ENSEMBL genes
6.4 years ago Bogdan ▴ 670
0
votes
0
replies
3.7k
views
Comment: C: using limma and edgeR for differential expression of Drop-seq/10xGenomics scRNA-
6.4 years ago Bogdan ▴ 670
0
votes
0
replies
1.4k
views
Comment: C: normalization of RNA-seq data after over-expressing the transcription factors
6.4 years ago Bogdan ▴ 670
4
votes
4
replies
3.7k
views
using limma and edgeR for differential expression of Drop-seq/10xGenomics scRNA-seq data
limma edgeR simplesingleCell scran scater
updated 6.4 years ago by ★ 29k • written 6.4 years ago by ▴ 670
4
votes
4
replies
1.4k
views
normalization of RNA-seq data after over-expressing the transcription factors
limma deseq2 voom edgeR
updated 6.4 years ago by ★ 29k • written 6.4 years ago by ▴ 670
0
votes
0
replies
3.7k
views
Comment: C: using limma and edgeR for differential expression of Drop-seq/10xGenomics scRNA-
6.4 years ago Bogdan ▴ 670
0
votes
0
replies
1.4k
views
Comment: C: normalization of RNA-seq data after over-expressing the transcription factors
6.4 years ago Bogdan ▴ 670
0
votes
0
replies
5.4k
views
Comment: C: correcting the batch effects in Limma and SVA
6.4 years ago Bogdan ▴ 670
0
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0
replies
5.4k
views
Comment: C: correcting the batch effects in Limma and SVA
6.4 years ago Bogdan ▴ 670
0
votes
2
replies
5.4k
views
Comment: C: correcting the batch effects in Limma and SVA
6.4 years ago Bogdan ▴ 670
8
votes
4
replies
5.4k
views
correcting the batch effects in Limma and SVA
limma combat sva
updated 6.4 years ago by 53k • written 6.4 years ago by ▴ 670
0
votes
0
replies
3.0k
views
Comment: C: scRNA-seq : runPCA() and denoisePCA()
6.5 years ago Bogdan ▴ 670
0
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1
reply
3.0k
views
Comment: C: scRNA-seq : runPCA() and denoisePCA()
6.5 years ago Bogdan ▴ 670
0
votes
1
reply
3.0k
views
Comment: C: scRNA-seq : runPCA() and denoisePCA()
6.5 years ago Bogdan ▴ 670
0
votes
0
replies
2.4k
views
Comment: C: scRNA-seq : Classification of cell cycle phase
6.5 years ago Bogdan ▴ 670
0
votes
1
reply
3.0k
views
Comment: C: scRNA-seq : runPCA() and denoisePCA()
6.5 years ago Bogdan ▴ 670
4
votes
4
replies
2.4k
views
scRNA-seq : Classification of cell cycle phase
scater scran
updated 6.5 years ago by ★ 29k • written 6.5 years ago by ▴ 670
3
votes
7
replies
3.0k
views
scRNA-seq : runPCA() and denoisePCA()
scater scran
updated 6.5 years ago by ★ 29k • written 6.5 years ago by ▴ 670
0
votes
0
replies
2.3k
views
Comment: C: number of cell clusters in scRNA-seq
6.5 years ago Bogdan ▴ 670
0
votes
1
reply
2.3k
views
Comment: C: number of cell clusters in scRNA-seq
6.5 years ago Bogdan ▴ 670
1
vote
4
replies
2.3k
views
number of cell clusters in scRNA-seq
scran scater sc3
updated 6.5 years ago by ★ 29k • written 6.5 years ago by ▴ 670
0
votes
0
replies
3.2k
views
Comment: C: differential expression between clusters (in distinct "treatments") in scRNAseq
6.5 years ago Bogdan ▴ 670
0
votes
0
replies
3.2k
views
Comment: C: differential expression between clusters (in distinct "treatments") in scRNAseq
6.5 years ago Bogdan ▴ 670
0
votes
0
replies
3.2k
views
Comment: C: differential expression between clusters (in distinct "treatments") in scRNAseq
6.5 years ago Bogdan ▴ 670
0
votes
1
reply
3.2k
views
Comment: C: differential expression between clusters (in distinct "treatments") in scRNAseq
6.5 years ago Bogdan ▴ 670
0
votes
1
reply
3.2k
views
Comment: C: differential expression between clusters (in distinct "treatments") in scRNAseq
6.5 years ago Bogdan ▴ 670
0
votes
7
replies
3.2k
views
differential expression between clusters (in distinct "treatments") in scRNAseq
scater limma scde scran sc3
6.5 years ago Bogdan ▴ 670
0
votes
0
replies
2.1k
views
Comment: C: about scRNA-seq, SEURAT and CCA
6.9 years ago Bogdan ▴ 670
0
votes
0
replies
2.1k
views
Comment: C: about scRNA-seq, SEURAT and CCA
6.9 years ago Bogdan ▴ 670
0
votes
3
replies
2.1k
views
about scRNA-seq, SEURAT and CCA
scRNA-seq
updated 6.9 years ago by 68k • written 6.9 years ago by ▴ 670
1
vote
1
reply
1.8k
views
gene counts in Seurat after RunCCA() and AlignSubspace()
scRNA-seq seurat CCA
updated 6.9 years ago by ★ 29k • written 6.9 years ago by ▴ 670
0
votes
0
replies
1.8k
views
Comment: C: about DropletUtils and scRNA-seq
6.9 years ago Bogdan ▴ 670
0
votes
1
reply
1.8k
views
Comment: C: about DropletUtils and scRNA-seq
6.9 years ago Bogdan ▴ 670
1
vote
5
replies
1.8k
views
about DropletUtils and scRNA-seq
dropseq dropletutils droplet
updated 6.9 years ago by ★ 29k • written 6.9 years ago by ▴ 670
0
votes
0
replies
1.8k
views
Comment: C: about DropletUtils and scRNA-seq
6.9 years ago Bogdan ▴ 670
0
votes
0
replies
3.6k
views
Comment: C: scRNA-seq: a question about the names of the columns in a Seurat object
7.0 years ago Bogdan ▴ 670
0
votes
1
reply
3.6k
views
Comment: C: scRNA-seq: a question about the names of the columns in a Seurat object
updated 7.0 years ago by ★ 13k • written 7.0 years ago by ▴ 670
0
votes
4
replies
3.6k
views
scRNA-seq: a question about the names of the columns in a Seurat object
scRNA-seq SEURAT
updated 7.0 years ago by ★ 13k • written 7.0 years ago by ▴ 670
0
votes
0
replies
1.3k
views
Comment: C: getting the sequences of 3UTR and the gene names
7.0 years ago Bogdan ▴ 670
0
votes
2
replies
1.3k
views
getting the sequences of 3UTR and the gene names
GenomeFeatures
updated 7.0 years ago by 68k • written 7.0 years ago by ▴ 670
0
votes
0
replies
1.3k
views
Comment: C: normalization of ChIP-seq data
7.1 years ago Bogdan ▴ 670
0
votes
3
replies
1.3k
views
normalization of ChIP-seq data
normalization chip-seq
7.1 years ago Bogdan ▴ 670
0
votes
0
replies
2.4k
views
Comment: C: gene set enrichment analysis
7.2 years ago Bogdan ▴ 670
0
votes
2
replies
2.4k
views
gene set enrichment analysis
GSEA GSA
updated 7.2 years ago by 53k • written 7.2 years ago by ▴ 670
9
votes
9
replies
12k
views
extracting gene names, gene id and transcript id
gtf
updated 7.3 years ago by ▴ 70 • written 7.3 years ago by ▴ 670
0
votes
0
replies
12k
views
Comment: C: extracting gene names, gene id and transcript id
7.3 years ago Bogdan ▴ 670
0
votes
1
reply
12k
views
Comment: C: extracting gene names, gene id and transcript id
7.3 years ago Bogdan ▴ 670
0
votes
0
replies
2.2k
views
Comment: C: the closest gene to a breakpoint
7.3 years ago Bogdan ▴ 670
4
votes
8
replies
2.2k
views
the closest gene to a breakpoint
granges plyranges
updated 7.3 years ago by 53k • written 7.3 years ago by ▴ 670
429 results • Page 3 of 9
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