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6
votes
4
replies
3.1k
views
the coordinates of exons of RefSeq or ENSEMBL genes
txdb genome exons
updated 5.4 years ago by 25k • written 5.4 years ago by ▴ 670
0
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0
replies
3.1k
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Comment: C: the coordinates of exons of RefSeq or ENSEMBL genes
5.4 years ago Bogdan ▴ 670
0
votes
0
replies
3.2k
views
Comment: C: using limma and edgeR for differential expression of Drop-seq/10xGenomics scRNA-
5.5 years ago Bogdan ▴ 670
0
votes
0
replies
1.1k
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Comment: C: normalization of RNA-seq data after over-expressing the transcription factors
5.5 years ago Bogdan ▴ 670
4
votes
4
replies
3.2k
views
using limma and edgeR for differential expression of Drop-seq/10xGenomics scRNA-seq data
limma edgeR simplesingleCell scran scater
updated 5.5 years ago by ★ 28k • written 5.5 years ago by ▴ 670
4
votes
4
replies
1.1k
views
normalization of RNA-seq data after over-expressing the transcription factors
limma deseq2 voom edgeR
updated 5.5 years ago by ★ 28k • written 5.5 years ago by ▴ 670
0
votes
0
replies
3.2k
views
Comment: C: using limma and edgeR for differential expression of Drop-seq/10xGenomics scRNA-
5.5 years ago Bogdan ▴ 670
0
votes
0
replies
1.1k
views
Comment: C: normalization of RNA-seq data after over-expressing the transcription factors
5.5 years ago Bogdan ▴ 670
0
votes
0
replies
4.5k
views
Comment: C: correcting the batch effects in Limma and SVA
5.5 years ago Bogdan ▴ 670
0
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0
replies
4.5k
views
Comment: C: correcting the batch effects in Limma and SVA
5.5 years ago Bogdan ▴ 670
0
votes
2
replies
4.5k
views
Comment: C: correcting the batch effects in Limma and SVA
5.5 years ago Bogdan ▴ 670
8
votes
4
replies
4.5k
views
correcting the batch effects in Limma and SVA
limma combat sva
updated 5.5 years ago by 52k • written 5.5 years ago by ▴ 670
0
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0
replies
2.4k
views
Comment: C: scRNA-seq : runPCA() and denoisePCA()
5.5 years ago Bogdan ▴ 670
0
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1
reply
2.4k
views
Comment: C: scRNA-seq : runPCA() and denoisePCA()
5.5 years ago Bogdan ▴ 670
0
votes
1
reply
2.4k
views
Comment: C: scRNA-seq : runPCA() and denoisePCA()
5.5 years ago Bogdan ▴ 670
0
votes
0
replies
1.9k
views
Comment: C: scRNA-seq : Classification of cell cycle phase
5.5 years ago Bogdan ▴ 670
0
votes
1
reply
2.4k
views
Comment: C: scRNA-seq : runPCA() and denoisePCA()
5.5 years ago Bogdan ▴ 670
4
votes
4
replies
1.9k
views
scRNA-seq : Classification of cell cycle phase
scater scran
updated 5.5 years ago by ★ 28k • written 5.5 years ago by ▴ 670
3
votes
7
replies
2.4k
views
scRNA-seq : runPCA() and denoisePCA()
scater scran
updated 5.5 years ago by ★ 28k • written 5.5 years ago by ▴ 670
0
votes
0
replies
1.8k
views
Comment: C: number of cell clusters in scRNA-seq
5.5 years ago Bogdan ▴ 670
0
votes
1
reply
1.8k
views
Comment: C: number of cell clusters in scRNA-seq
5.5 years ago Bogdan ▴ 670
1
vote
4
replies
1.8k
views
number of cell clusters in scRNA-seq
scran scater sc3
updated 5.5 years ago by ★ 28k • written 5.5 years ago by ▴ 670
0
votes
0
replies
2.6k
views
Comment: C: differential expression between clusters (in distinct "treatments") in scRNAseq
5.5 years ago Bogdan ▴ 670
0
votes
0
replies
2.6k
views
Comment: C: differential expression between clusters (in distinct "treatments") in scRNAseq
5.5 years ago Bogdan ▴ 670
0
votes
0
replies
2.6k
views
Comment: C: differential expression between clusters (in distinct "treatments") in scRNAseq
5.5 years ago Bogdan ▴ 670
0
votes
1
reply
2.6k
views
Comment: C: differential expression between clusters (in distinct "treatments") in scRNAseq
5.5 years ago Bogdan ▴ 670
0
votes
1
reply
2.6k
views
Comment: C: differential expression between clusters (in distinct "treatments") in scRNAseq
5.5 years ago Bogdan ▴ 670
0
votes
7
replies
2.6k
views
differential expression between clusters (in distinct "treatments") in scRNAseq
scater limma scde scran sc3
5.6 years ago • updated 5.5 years ago Bogdan ▴ 670
0
votes
0
replies
1.7k
views
Comment: C: about scRNA-seq, SEURAT and CCA
6.0 years ago Bogdan ▴ 670
0
votes
0
replies
1.7k
views
Comment: C: about scRNA-seq, SEURAT and CCA
6.0 years ago Bogdan ▴ 670
0
votes
3
replies
1.7k
views
about scRNA-seq, SEURAT and CCA
scRNA-seq
updated 6.0 years ago by 67k • written 6.0 years ago by ▴ 670
1
vote
1
reply
1.5k
views
gene counts in Seurat after RunCCA() and AlignSubspace()
scRNA-seq seurat CCA
updated 6.0 years ago by ★ 28k • written 6.0 years ago by ▴ 670
0
votes
0
replies
1.5k
views
Comment: C: about DropletUtils and scRNA-seq
6.0 years ago Bogdan ▴ 670
0
votes
1
reply
1.5k
views
Comment: C: about DropletUtils and scRNA-seq
6.0 years ago Bogdan ▴ 670
1
vote
5
replies
1.5k
views
about DropletUtils and scRNA-seq
dropseq dropletutils droplet
updated 6.0 years ago by ★ 28k • written 6.0 years ago by ▴ 670
0
votes
0
replies
1.5k
views
Comment: C: about DropletUtils and scRNA-seq
6.0 years ago Bogdan ▴ 670
0
votes
0
replies
3.2k
views
Comment: C: scRNA-seq: a question about the names of the columns in a Seurat object
6.1 years ago Bogdan ▴ 670
0
votes
1
reply
3.2k
views
Comment: C: scRNA-seq: a question about the names of the columns in a Seurat object
updated 6.1 years ago by ★ 13k • written 6.1 years ago by ▴ 670
0
votes
4
replies
3.2k
views
scRNA-seq: a question about the names of the columns in a Seurat object
scRNA-seq SEURAT
updated 6.1 years ago by ★ 13k • written 6.1 years ago by ▴ 670
0
votes
0
replies
1.0k
views
Comment: C: getting the sequences of 3UTR and the gene names
6.1 years ago Bogdan ▴ 670
0
votes
2
replies
1.0k
views
getting the sequences of 3UTR and the gene names
GenomeFeatures
updated 6.1 years ago by 67k • written 6.1 years ago by ▴ 670
0
votes
0
replies
1.0k
views
Comment: C: normalization of ChIP-seq data
6.2 years ago Bogdan ▴ 670
0
votes
3
replies
1.0k
views
normalization of ChIP-seq data
normalization chip-seq
6.2 years ago Bogdan ▴ 670
0
votes
0
replies
1.9k
views
Comment: C: gene set enrichment analysis
6.2 years ago Bogdan ▴ 670
0
votes
2
replies
1.9k
views
gene set enrichment analysis
GSEA GSA
updated 6.2 years ago by 52k • written 6.2 years ago by ▴ 670
9
votes
9
replies
10.0k
views
extracting gene names, gene id and transcript id
gtf
updated 6.4 years ago by ▴ 70 • written 6.4 years ago by ▴ 670
0
votes
0
replies
10.0k
views
Comment: C: extracting gene names, gene id and transcript id
6.4 years ago Bogdan ▴ 670
0
votes
1
reply
10.0k
views
Comment: C: extracting gene names, gene id and transcript id
6.4 years ago Bogdan ▴ 670
0
votes
0
replies
1.8k
views
Comment: C: the closest gene to a breakpoint
6.4 years ago Bogdan ▴ 670
4
votes
8
replies
1.8k
views
the closest gene to a breakpoint
granges plyranges
updated 6.4 years ago by 52k • written 6.4 years ago by ▴ 670
429 results • Page 3 of 9
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