Biostar GSA

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720

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GSEA GSA

updated 3.6 years ago by Gordon Smyth 45k • written 3.6 years ago by Bogdan ▴ 640

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751

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crlmm gsa microarray illumina

updated 4.0 years ago by funnyjokes1.com • 0 • written 4.0 years ago by shaun • 0

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388

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GSA

4.2 years ago Seymoo • 0

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1.2k

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gsea concept gsa

updated 5.3 years ago by Pekka Kohonen ▴ 190 • written 5.3 years ago by Lluís Revilla Sancho ▴ 660

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982

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GSA

updated 5.3 years ago by Martin Morgan 25k • written 5.3 years ago by epercamh • 0

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1.1k

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gsea gsa

updated 6.2 years ago by Axel Klenk ▴ 990 • written 6.2 years ago by Bogdan ▴ 640

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1.2k

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limma GSA confounding within-pair analysis 450k

7.1 years ago Aileen Bahl ▴ 10

7 results • Page 1 of 1

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Comment: rtracklayer S.h by gibran • 0

Thanks, much appreciated. So I think this approach actually gets binaries and I'm not sure how to isolate the problem I was experiencing as…

Comment: DESeq2, Calculate the size factor by using median-of-ratio by KEREN • 0

Hi Michael, thank you for you reply. My concern here mainly focus on the high variances in samples of condition "mESC_mRNA_WT". I observed…

Comment: DiffBind: 0 consensus peaks for dba.peakset: New bug / undocumented change intro by Rory Stark ★ 4.4k

I agree the documentation could be clearer -- it took me a while to understand what it said so I could address your issue!

Answer: DiffBind: 0 consensus peaks for dba.peakset: New bug / undocumented change intro by chrarnold • 0

Thanks a lot for your quick reply, it is very appreciated! Indeed, with your 2 suggested modifications, I can again reproduce the results f…

Answer: DiffBind: 0 consensus peaks for dba.peakset: New bug / undocumented change intro by Rory Stark ★ 4.4k

The object in the `.rds` file, `sampleMetaData.df`, is already a `DBA` object, with eight samples: > sampleMetaData.df <- readRDS("~/D…

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Answer: rtracklayer S.h

Answer: DESeq2: Extracting Averaged Counts Information from dds and rld

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