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dealing with outliers (deseq2)
maxcooks outliers zero counts DESeq2
updated 2.1 years ago by 41k • written 2.1 years ago by ▴ 10
3
votes
7
replies
1.4k
views
small dimensions in the matrix of counts from smallRNA using DESEq2
matrix DESeq2 SmallRNA dimensions small
2.6 years ago andreia ▴ 10
1
vote
1
reply
2.6k
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create S-plots with ropls package
s-plot ropls opls-da rna-seq
updated 2.7 years ago by ▴ 10 • written 3.8 years ago by ▴ 10
0
votes
2
replies
978
views
Deseq2 cooks filter for 2 replicates x 3 replicates
DESeq2 Nullcook'svalues 2x3 DEGs
3.1 years ago andreia ▴ 10
3
votes
6
replies
1.7k
views
deseq2 + filtering low counts with noiseq function
deseq2 noiseq lowcounts rnaseq
updated 2.3 years ago by 41k • written 3.6 years ago by ▴ 10
0
votes
1
reply
828
views
mircomb analysis from deg's list
mircomb mrna mirna degs interaction
3.8 years ago andreia ▴ 10
0
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2
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786
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mirna-mrna interation mircomb (from DEGs and DEMs lists)
deseq2 mircomb degs dems
updated 3.8 years ago by 41k • written 3.8 years ago by ▴ 10
0
votes
2
replies
1.6k
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DESeq2 doubts about transformations + nbinomWaldtest warning
rna-seq deseq2 warnings nbinomWaldTest transformation
updated 3.8 years ago by 41k • written 3.8 years ago by ▴ 10
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