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961
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Which software can work withThermo ProteomeDiscover software output?
ProteomicsWorkflow proteomics proteinProfiles
updated 19 months ago by 1.6k • written 3.9 years ago by ▴ 20
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1
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1.8k
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Answer: Comment: Error: Aesthetics must be either length 1 or the same as the data (1): x and xen
3.6 years ago yueli7 ▴ 20
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2
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1.8k
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Error: Aesthetics must be either length 1 or the same as the data (1): x and xend
fgsea
updated 3.6 years ago by ★ 4.0k • written 3.6 years ago by ▴ 20
0
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0
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673
views
remove batch effect of SILAC protein data
proBatch
3.8 years ago yueli7 ▴ 20
0
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0
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1.9k
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Comment: Comment: change all the negative value into positive value
3.8 years ago yueli7 ▴ 20
4
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4
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1.9k
views
change all the negative value into positive value
vsn
3.8 years ago yueli7 ▴ 20
0
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1
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1.9k
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Comment: Comment: change all the negative value into positive value
3.8 years ago yueli7 ▴ 20
0
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0
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15k
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Comment: Comment: ah <- AnnotationHub() Error in UseMethod("filter_"): no applicable method for '
3.9 years ago yueli7 ▴ 20
0
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1
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15k
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Comment: Comment: ah <- AnnotationHub() Error in UseMethod("filter_"): no applicable method for '
3.9 years ago yueli7 ▴ 20
0
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1
reply
15k
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Comment: Comment: ah <- AnnotationHub() Error in UseMethod("filter_"): no applicable method for '
3.9 years ago yueli7 ▴ 20
0
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1
reply
1.2k
views
R package to change protein *.msf file to any readable file
Proteome ProteomicsWorkflow proteomics
updated 3.9 years ago by ★ 1.4k • written 3.9 years ago by ▴ 20
3
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3
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1.2k
views
se does not inherit from class SummarizedExperiment
DEP
3.9 years ago yueli7 ▴ 20
0
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0
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1.2k
views
Comment: Comment: se does not inherit from class SummarizedExperiment
3.9 years ago yueli7 ▴ 20
0
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0
replies
766
views
Which package I can use?
MSnbase DAPAR DEP
3.9 years ago yueli7 ▴ 20
0
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2
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1.0k
views
normalize the SILAC light heavy value
RforProteomics
3.9 years ago yueli7 ▴ 20
0
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0
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1.0k
views
Comment: Comment: normalize the SILAC light heavy value
3.9 years ago yueli7 ▴ 20
0
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2
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906
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package ‘MSGFplus’ is not available (for R
MSGFplus
3.9 years ago yueli7 ▴ 20
0
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0
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906
views
Comment: Comment: package ‘MSGFplus’ is not available (for R
3.9 years ago yueli7 ▴ 20
0
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0
replies
724
views
Error in data.frame(ASSIGN = "ASSIGN parameters", version = as.character(utils::packageVersion("ASSIGN")), : arguments imply differing number of …
software error assign
4.3 years ago yueli7 ▴ 20
0
votes
4
replies
4.5k
views
ggplot2 of PCA
software error ggplot2
updated 4.3 years ago by • 0 • written 4.3 years ago by ▴ 20
0
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0
replies
4.5k
views
Comment: C: ggplot2 of PCA
4.3 years ago yueli7 ▴ 20
4
votes
4
replies
7.1k
views
plotPCA in DESeq2
software error deseq2
4.3 years ago yueli7 ▴ 20
0
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0
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7.1k
views
Comment: C: pltPCA in DESeq2
4.3 years ago yueli7 ▴ 20
0
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0
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7.1k
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Comment: C: pltPCA in DESeq2
4.3 years ago yueli7 ▴ 20
1
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0
replies
3.1k
views
Comment: C: plotPCA in DESeq2
4.3 years ago yueli7 ▴ 20
0
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1
reply
3.1k
views
Comment: C: plotPCA in DESeq2
4.3 years ago yueli7 ▴ 20
2
votes
20
replies
3.1k
views
plotPCA in DESeq2
software error deseq2
4.3 years ago yueli7 ▴ 20
0
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0
replies
3.1k
views
Comment: C: plotPCA in DESeq2
4.3 years ago yueli7 ▴ 20
0
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0
replies
3.1k
views
Comment: C: plotPCA in DESeq2
4.3 years ago yueli7 ▴ 20
0
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1
reply
3.1k
views
Comment: C: plotPCA in DESeq2
4.3 years ago yueli7 ▴ 20
0
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1
reply
3.1k
views
Comment: C: plotPCA in DESeq2
4.3 years ago yueli7 ▴ 20
0
votes
0
replies
386
views
Error in (function (classes, fdef, mtable) in SCnorm
software error
4.6 years ago yueli7 ▴ 20
0
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0
replies
958
views
Comment: C: error in SCnorm
4.6 years ago yueli7 ▴ 20
0
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0
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958
views
Comment: C: error in SCnorm
4.6 years ago yueli7 ▴ 20
0
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0
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4.5k
views
Comment: C: R package for single-cell RNA-seq data from fastq to matrix
4.6 years ago yueli7 ▴ 20
0
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1
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4.5k
views
Comment: C: R package for single-cell RNA-seq data from fastq to matrix
4.6 years ago yueli7 ▴ 20
3
votes
6
replies
4.5k
views
R package for single-cell RNA-seq data from fastq to matrix
single cell
updated 4.6 years ago by ★ 28k • written 4.6 years ago by ▴ 20
1
vote
4
replies
958
views
error in SCnorm
scnorm
4.6 years ago yueli7 ▴ 20
0
votes
5
replies
3.1k
views
meaning of the warning In .get_cds_IDX(mcols0$type, mcols0$phase)
GenomicFeature
4.7 years ago yueli7 ▴ 20
0
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0
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3.1k
views
Comment: C: In .get_cds_IDX(mcols0$type, mcols0$phase)
4.7 years ago yueli7 ▴ 20
0
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1
reply
3.1k
views
Comment: C: In .get_cds_IDX(mcols0$type, mcols0$phase)
4.7 years ago yueli7 ▴ 20
0
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0
replies
794
views
Comment: C: chippeakanno annotation
5.3 years ago yueli7 ▴ 20
0
votes
1
reply
794
views
chippeakanno annotation
annotation
5.3 years ago yueli7 ▴ 20
0
votes
1
reply
1.5k
views
rcorr problem of Hmisc package
hmisc software error
updated 6.3 years ago by 4.0k • written 6.3 years ago by ▴ 20
0
votes
0
replies
1.1k
views
Comment: C: want the piece of the matrix I wanted
6.3 years ago yueli7 ▴ 20
1
vote
2
replies
1.1k
views
want the piece of the matrix I wanted
matrix
updated 6.3 years ago by ★ 1.0k • written 6.3 years ago by ▴ 20
0
votes
1
reply
1.2k
views
Comment: C: edgeR and DESeq2
updated 6.4 years ago by 51k • written 6.4 years ago by ▴ 20
0
votes
5
replies
1.2k
views
edgeR and DESeq2
edger deseq2
updated 6.4 years ago by 51k • written 6.4 years ago by ▴ 20
4
votes
2
replies
1.6k
views
how to calculate the logFC value
edger
updated 6.4 years ago by 51k • written 6.4 years ago by ▴ 20
2
votes
2
replies
819
views
no replicates data
edger
updated 6.4 years ago by 51k • written 6.4 years ago by ▴ 20
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