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Bile acid analysis with limpa
limpa
MassSpectrometry
MassSpectrometryData
updated 9 hours ago by
ATpoint
★ 5.0k • written 2 days ago by
DN
• 0
0
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12
replies
502
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Making a Full Rank Model for Allele-Specific Expression with DESeq2
DESeq2
updated 21 hours ago by
Gordon Smyth
53k • written 3 days ago by
chp265
• 0
0
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2
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189
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Are individual-mouse-based statistics possible in CellChat?
Bioconductor
CellChat
updated 13 hours ago by
LillianaVolkman99
• 0 • written 10 days ago by
Omer
• 0
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chemmineOB install help
ChemmineOB
Install
updated 12 hours ago by
Jeremy
• 0 • written 19 months ago by
jrbald04
• 0
4 results • Page
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Comment: Bile acid analysis with limpa
by
ATpoint
★ 5.0k
Wilcox/Mann-Whitney-U cannot work because it is bound to sample size even when all of group X are lower than all of group Y. At 4 vs 3 the …
Comment: chemmineOB install help
by
Jeremy
• 0
I could install ChemmineOB on my MacBook Pro M1 Max using this procedure **1. Install open-babel and eigen using homebrew and create a cus…
Comment: Making a Full Rank Model for Allele-Specific Expression with DESeq2
by
Gordon Smyth
53k
The design matrix that I described above is completely general. I imagine that it would be possible to use the same approach to generate fu…
Comment: Making a Full Rank Model for Allele-Specific Expression with DESeq2
by
chp265
• 0
Cool, glad to hear I wasn't missing some functionality in DESeq2. I don't know that much about the differences between DESeq2 vs edgeR; my …
Comment: Making a Full Rank Model for Allele-Specific Expression with DESeq2
by
Michael Love
43k
Yes, so for one thing, note that Gordon has provided code for doing what you are asking in edgeR, which you can go ahead and use. You aske…
Votes
A: DESeq2: Is it possible to convert read counts to expression values via TPM and r
A: Filtering read counts matrix: how to deal with duplicated gene symbols, differen
Comment: limpa analysis advice
Answer: When to use edgeR or limma
Answer: When to use edgeR or limma
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