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Replies
Comment: Limma paired analysis design question
by
jefflincoln4
•
0
Thank you Gordon. One more thing, why use the log of blood iron concentration?
Answer: Limma paired analysis design question
by
Gordon Smyth
42k
Just put (log) blood iron concentration and `pair` in the design matrix. limma will work with differences automatically -- there's no need…
Comment: Extracting the findPalindrome() results
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Hervé Pagès
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Also, you have a point: the output of `Biostrings::findPalindromes()` is an XStringViews object and `as.data.frame()` does a poor job on th…
Comment: Compute fgsea with my own database with R version 4.0.2
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assaron
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I'm not sure what would be the best course of action in your case, if there is one at all, but I'd suggest to keep the ranking on the gene-…
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Go through the error logs and find the first error, this is where you have to start debugging, this here is just the consequences of the in…
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