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0
votes
3
replies
3.1k
views
Outlier detection in DEseq
Genetics
DESeq
Genetics
DESeq
updated 15.2 years ago by
Simon Anders
★ 3.8k • written 15.2 years ago by
Rui Luo
▴ 20
0
votes
1
reply
1.1k
views
Rgraphviz with rApache problems
Rgraphviz
Rgraphviz
15.2 years ago
Robert M. Flight
▴ 280
0
votes
2
replies
1.1k
views
EdgeR questions in analyzing 454 data-about prior.n, TMM, and p_value
Normalization
edgeR
Normalization
edgeR
updated 15.2 years ago by
Gordon Smyth
53k • written 15.2 years ago by
Ying Ye
▴ 10
0
votes
3
replies
1.6k
views
Processing of Illumina Infinium methylation microarray data using lumi - addColorChannelInfo bug?
lumi
lumi
updated 15.2 years ago by
Sean Davis
21k • written 15.2 years ago by
Paolo Sonego
▴ 140
0
votes
2
replies
1.8k
views
New gage package: Generally Applicable Gene-set/Pathway Analysis
Sequencing
Microarray
Pathways
GO
Yeast
gage
Sequencing
Microarray
Pathways
GO
Yeast
15.2 years ago
Luo Weijun
★ 1.6k
0
votes
0
replies
790
views
Mac binaries for R 2.12 fixed
Cancer
Cancer
15.2 years ago
Hervé Pagès
16k
0
votes
0
replies
1.1k
views
R: Doubt about the use of xmapcore Vs exonmap
exonmap
xmapcore
exonmap
xmapcore
15.2 years ago
Manca Marco PATH
▴ 340
0
votes
0
replies
2.1k
views
Percentage of Variance to be included at 3D graph, of Principal Component Analysis (PCA)- made4 package
Cancer
graph
made4
Cancer
graph
made4
15.2 years ago
Aedin Culhane
▴ 510
0
votes
1
reply
1.6k
views
Biobase in R 2.12 referencing libR.dylib from R 2.11, bug?
Cancer
Biobase
Cancer
Biobase
updated 15.2 years ago by
Hervé Pagès
16k • written 15.2 years ago by
Josef Spidlen
▴ 140
0
votes
3
replies
1.4k
views
Compilation problem RBGL_1.26
updated 15.2 years ago by
Vincent J. Carey, Jr.
6.7k • written 15.2 years ago by
Bernt Guldbrandtsen
▴ 50
0
votes
1
reply
1.0k
views
Problems with oligo package : Nimblegen microarray analysis
updated 15.2 years ago by
Benilton Carvalho
★ 4.3k • written 15.2 years ago by
Michael MOZAR
▴ 60
0
votes
0
replies
1.3k
views
Agi4x44PreProcess - filter.probes function
Annotation
GUI
zebrafish
probe
PROcess
Annotation
GUI
zebrafish
probe
PROcess
15.2 years ago
Neel Aluru
▴ 460
0
votes
1
reply
999
views
Human genomic sequences
genomes
genomes
updated 15.2 years ago by
Vincent J. Carey, Jr.
6.7k • written 15.2 years ago by
Sheena Scroggins
▴ 30
0
votes
0
replies
888
views
issues with oligo package
15.2 years ago
Michael MOZAR
▴ 60
0
votes
3
replies
1.5k
views
svn version of rtracklayer error
rtracklayer
rtracklayer
15.2 years ago
Michael Dondrup
▴ 550
0
votes
0
replies
1.7k
views
Bioconductor 2.7 is released
BiocViews
aCGH
Transcription
RNASeq
miRNA
Microarray
Normalization
Network
Bayesian
aCGH
15.2 years ago
Martin Morgan
25k
0
votes
5
replies
1.7k
views
matrix transformation
updated 15.2 years ago by
Ido M. Tamir
▴ 150 • written 15.2 years ago by
Bucher Elmar
▴ 80
0
votes
3
replies
3.0k
views
Percentage of Variance to be included at 3D graph of Principal Component Analysis (PCA)- made4 package
GO
graph
GO
graph
15.3 years ago • updated 15.2 years ago
John Antonydas Gaspar
▴ 130
0
votes
6
replies
1.9k
views
multicore Vignette or HowTo??
updated 15.2 years ago by
Martin Morgan
25k • written 15.2 years ago by
Edwin Groot
▴ 230
0
votes
0
replies
1.0k
views
Statistical Bioinformatics Position in Oxford
15.2 years ago
Steve Taylor
▴ 280
0
votes
1
reply
757
views
scaling on normlized data set
updated 15.2 years ago by
Sean Davis
21k • written 15.2 years ago by
Hossain Nawaz
▴ 10
0
votes
1
reply
1.0k
views
Discrepancy in differential expression gene list after intraspot correlation
limma
limma
15.2 years ago
Gordon Smyth
53k
0
votes
0
replies
925
views
Limma :: decideTest question
Microarray
limma
Microarray
limma
15.2 years ago
Gordon Smyth
53k
0
votes
2
replies
2.4k
views
ArrayExpress: missing cdf environment!
Cancer
hgu133a
cdf
ArrayExpress
Cancer
hgu133a
cdf
ArrayExpress
updated 15.2 years ago by
Wolfgang Huber
★ 13k • written 15.2 years ago by
Daniel Rico
▴ 110
0
votes
1
reply
630
views
issues while using KEGGSOAP
updated 15.2 years ago by
Wolfgang Huber
★ 13k • written 15.2 years ago by
Swati Sinha
▴ 20
0
votes
4
replies
1.9k
views
faster way to get differential calls from pileup?
SNP
Sequencing
PROcess
SNP
Sequencing
PROcess
updated 15.2 years ago by
Sean Davis
21k • written 15.2 years ago by
wrighth
▴ 260
0
votes
0
replies
1.1k
views
Tenure-track position in Applied Statistics, Purdue University
15.2 years ago
Olga Vitek
▴ 40
0
votes
1
reply
1.5k
views
clustering of microarray time-series data
Microarray
Clustering
limma
maSigPro
Microarray
Clustering
limma
maSigPro
updated 15.2 years ago by
avehna
▴ 240 • written 15.2 years ago by
boczniak767
▴ 740
0
votes
0
replies
1.0k
views
Pairwise Function Output
probe
probe
15.2 years ago
Lakshmi Kastury
▴ 40
0
votes
2
replies
1.2k
views
rtracklayer: import.gff seems to be very slow
Annotation
Annotation
updated 15.2 years ago by
Michael Lawrence
★ 11k • written 15.2 years ago by
Michael Dondrup
▴ 550
0
votes
4
replies
2.2k
views
help with flank()
IRanges
IRanges
updated 15.2 years ago by
Vincent J. Carey, Jr.
6.7k • written 15.2 years ago by
joseph
▴ 330
0
votes
0
replies
923
views
clustering of microarray time-series data
limma
limma
15.2 years ago
avehna
▴ 240
0
votes
3
replies
1.6k
views
Problem installing Rsamtools and ShortRead under Fedora 10.
ShortRead
Rsamtools
ShortRead
Rsamtools
updated 15.2 years ago by
Vincent J. Carey, Jr.
6.7k • written 15.2 years ago by
Bernt Guldbrandtsen
▴ 50
0
votes
0
replies
1.5k
views
Job Posting: Scientific Programmer
Sequencing
Cancer
cdf
Sequencing
Cancer
cdf
15.2 years ago
Greg Finak
▴ 240
0
votes
3
replies
1.7k
views
EBImage installs but won't load on Mac OS 10.6.4
GUI
PROcess
convert
EBImage
GUI
PROcess
convert
EBImage
updated 15.2 years ago by
Gregoire Pau
▴ 310 • written 15.3 years ago by
W. A. Green
▴ 40
0
votes
4
replies
1.1k
views
Bug in set operations over IRanges objects with non-NULL elementMetadata()
Cancer
Cancer
15.3 years ago
Steve Lianoglou
★ 13k
0
votes
5
replies
1.5k
views
Why is *ply-ing over a GRangesList much slower than *ply-ing over an IRangesList?
GO
Cancer
GO
Cancer
updated 15.3 years ago by
Steve Lianoglou
★ 13k • written 15.3 years ago by
Martin Morgan
25k
0
votes
0
replies
1.0k
views
logFC and fold change
15.3 years ago
Marcelo Brandão
▴ 110
0
votes
4
replies
2.7k
views
affyPara
cdf
affy
affyPara
cdf
affy
affyPara
15.3 years ago
danieladna
▴ 110
0
votes
1
reply
1.0k
views
How many folds?
Microarray
Microarray
updated 15.3 years ago by
Sean Davis
21k • written 15.3 years ago by
Marcelo Brandão
▴ 110
0
votes
0
replies
1.1k
views
Limma :: decideTest question
Microarray
Microarray
15.3 years ago
Lorenzo Bomba
▴ 20
0
votes
7
replies
2.0k
views
ecoli2.db
Annotation
PROcess
Annotation
PROcess
updated 15.3 years ago by
Marc Carlson
★ 7.2k • written 15.3 years ago by
Clémentine Dressaire
▴ 120
0
votes
3
replies
1.3k
views
Illumina DGE => sRNA detection pipeline
15.3 years ago
Oleg Moskvin
▴ 60
0
votes
6
replies
1.7k
views
Error using arrayQuality and Agilent txt files
arrayQuality
arrayQuality
15.3 years ago
F. Javier López
▴ 30
0
votes
6
replies
2.3k
views
Puma question
cdf
GEOquery
puma
cdf
GEOquery
puma
15.3 years ago
Manca Marco PATH
▴ 340
0
votes
4
replies
3.1k
views
bed file around the TSSs
updated 15.3 years ago by
Vincent J. Carey, Jr.
6.7k • written 15.3 years ago by
joseph
▴ 330
4
votes
1
reply
3.0k
views
Gene Ontology: filtering out most informative terms from a list of GO terms
GO
graph
GO
graph
updated 15.3 years ago by
Marc Carlson
★ 7.2k • written 15.3 years ago by
Aaron Weimann
▴ 30
0
votes
2
replies
1.5k
views
omitted rows using getBM
probe
biomaRt
probe
biomaRt
updated 15.3 years ago by
Steffen
▴ 500 • written 15.3 years ago by
Mcmahon, Kevin
▴ 70
0
votes
1
reply
1.1k
views
Aniket Mishra wants to stay in touch on LinkedIn
Network
Network
15.3 years ago
Aniket Vatsya
▴ 40
0
votes
1
reply
1.3k
views
affypara
cdf
affy
affyPara
cdf
affy
affyPara
updated 15.3 years ago by
Valerie Obenchain
★ 6.8k • written 15.3 years ago by
danieladna
▴ 110
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