0
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2
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2.0k
views
Help with loading newly created custom annotation db into R session
Annotation GO GUI zebrafish probe Annotation GO GUI zebrafish probe
updated 17.0 years ago by 68k • written 17.0 years ago by ▴ 300
0
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0
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826
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Possible bug in `readPositionalInfo` function of 'snapCGH' package?
17.0 years ago Zhi-Qiang Ye ▴ 60
0
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0
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1.2k
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readChp in affxparser
affxparser affxparser
17.1 years ago Henrik Bengtsson ★ 2.4k
0
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1
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1.1k
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Xiangli added you as a friend on Reunion.com!
17.1 years ago Justin Zhang ▴ 30
0
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1
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788
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Does any one know a package that allow command line dChip normalization with a specific median array?
updated 17.1 years ago by ★ 2.4k • written 17.1 years ago by ▴ 110
0
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0
replies
958
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limma separate channel analysis of two-color data
17.1 years ago De-Jian ZHAO ▴ 240
0
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2
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1.3k
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Unable to load Rgaphviz
Rgraphviz Rgraphviz
updated 17.1 years ago by 25k • written 17.1 years ago by ▴ 270
0
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7
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2.5k
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Kegg pathway --> gene network
Pathways Network Pathways Network
updated 17.1 years ago by 25k • written 17.1 years ago by ▴ 40
0
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1.4k
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backgroundCorrect for RGlist
updated 17.1 years ago by ★ 13k • written 17.1 years ago by ▴ 30
0
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0
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957
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Bist Du auch dabei?
17.1 years ago Dating Online ▴ 10
0
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1
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1.2k
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Aroma breaks when reading >2 Agilent 44k custom arrays
Microarray Microarray
updated 17.1 years ago by ★ 2.4k • written 17.1 years ago by ▴ 80
0
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2
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1.1k
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Printtiploess error
Normalization Normalization
updated 17.1 years ago by 21k • written 17.1 years ago by ▴ 380
0
votes
2
replies
1.3k
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onvert an already existing CDF environment into a CDF file or CDF package
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updated 17.1 years ago by ▴ 330 • written 17.1 years ago by ★ 1.0k
0
votes
0
replies
723
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NormalizationWithinArrays
oligo oligo
17.1 years ago Priscila Grynberg ▴ 380
0
votes
0
replies
1.2k
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2009 Courses***R/S-PLUS Advanced & Fundamentals - January 2009. Also check out our New&Emerging Courses.
Clustering Survival Clustering Survival
17.1 years ago sue@xlsolutions-corp.com ▴ 570
0
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1
reply
783
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Bioconductor Digest, Vol 70, Issue 23
updated 17.1 years ago by ▴ 190 • written 17.1 years ago by ▴ 380
0
votes
3
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1.2k
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discrepancies using different gcRMA
gcrma gcrma
updated 17.1 years ago by ▴ 260 • written 17.1 years ago by ▴ 20
0
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2
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1.0k
views
NormalizeWithinArrays
updated 17.1 years ago by 21k • written 17.1 years ago by ▴ 380
0
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3
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2.9k
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heatmap.2
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updated 17.1 years ago by 21k • written 17.1 years ago by ▴ 10
0
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2
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2.9k
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Problems with read.maimages
limma limma
updated 17.1 years ago by ▴ 190 • written 17.1 years ago by ▴ 380
0
votes
1
reply
1.7k
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Talk & Poster - Final Call - qPCR 2009 Event
SNP qPCR Normalization Visualization Regression Cancer probe PROcess microRNA SNP qPCR
17.1 years ago qPCR Platform - the reference in real-t… ▴ 170
0
votes
9
replies
2.9k
views
affy package RMA results difference from R2.5 to R2.8
affy affyio affy affyio
updated 17.1 years ago by ▴ 140 • written 17.1 years ago by ▴ 360
0
votes
1
reply
1.0k
views
use alternative CDF in aroma.affymetrix in linux
cdf cdf
updated 17.1 years ago by ▴ 200 • written 17.1 years ago by ★ 1.0k
0
votes
0
replies
861
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Bioc-devel Digest, Vol 57, Issue 4
Annotation Normalization GO affy PROcess Annotation Normalization GO affy PROcess
17.1 years ago rcaloger ▴ 500
0
votes
0
replies
675
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Interesting cooperation proposal for your website
17.1 years ago Jennifer Clarkson ▴ 10
0
votes
7
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2.2k
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ensembl biomart
biomaRt biomaRt
updated 17.1 years ago by ▴ 600 • written 17.1 years ago by ▴ 50
0
votes
2
replies
1.9k
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Processing exon array in bioconductor
cdf cdf
updated 17.1 years ago by 68k • written 17.1 years ago by ▴ 10
0
votes
1
reply
1.0k
views
biomaRt difference from biomart.org?
PROcess biomaRt PROcess biomaRt
updated 17.1 years ago by ▴ 660 • written 17.1 years ago by ▴ 30
0
votes
1
reply
1.6k
views
A CGH platform question
SNP Genetics Coverage CGH affy SNP Genetics Coverage CGH affy
updated 17.1 years ago by ★ 2.4k • written 17.1 years ago by ▴ 70
0
votes
9
replies
2.8k
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Normalized microarray data and meta-analysis
Microarray Normalization Microarray Normalization
updated 17.1 years ago by ▴ 970 • written 17.1 years ago by ▴ 70
0
votes
2
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1.2k
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Error in getting MA plot with plotPrintTipLoess command for 244K chip data
updated 17.1 years ago by 21k • written 17.1 years ago by ▴ 90
0
votes
0
replies
1.8k
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qPCR NEWS - December 2008
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17.1 years ago qPCR Platform - the reference in real-t… ▴ 170
0
votes
2
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1.2k
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RMA error in cdf environment with removed probes (Yeast2)
yeast2 yeast2
updated 17.1 years ago by ★ 2.0k • written 17.1 years ago by ▴ 70
0
votes
3
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2.9k
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read.maimages in limma package
limma limma
17.1 years ago Giusy Della Gatta ▴ 110
0
votes
4
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2.7k
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two color array vs. one color array
updated 17.1 years ago by ★ 6.0k • written 17.1 years ago by ▴ 110
0
votes
2
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1.2k
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Error in function read.spikein of affycomp
affycomp affycomp
17.1 years ago cstrato ★ 3.9k
0
votes
2
replies
3.3k
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How to retrieve 'conservation score' sequence?
Transcription biomaRt Transcription biomaRt
updated 17.1 years ago by ▴ 620 • written 17.1 years ago by ★ 4.1k
0
votes
2
replies
1.4k
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targets frame
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17.1 years ago Giusy Della Gatta ▴ 110
0
votes
3
replies
1.1k
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Questions about Limma package
limma limma
17.1 years ago Priscila Grynberg ▴ 380
0
votes
2
replies
1.5k
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KEGG.db in GoStats with Streptomyces coelicolor
Microarray Annotation GOstats Microarray Annotation GOstats
updated 17.1 years ago by ★ 7.2k • written 17.1 years ago by ▴ 20
0
votes
0
replies
570
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Dentist.s Listing for the United States
17.1 years ago greenware Richards ▴ 10
0
votes
2
replies
1.4k
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RWebServices installation
RWebServices SJava RWebServices SJava
updated 17.1 years ago by 25k • written 17.1 years ago by ▴ 70
0
votes
9
replies
2.6k
views
combineAffyBatch problem
cdf cdf
17.1 years ago Rifat A Hamoudi ▴ 50
0
votes
0
replies
1.1k
views
Visualising SOM output as U-matrix in R\Bioconductor
Clustering Clustering
17.1 years ago Paul Geeleher ★ 1.3k
0
votes
2
replies
1.3k
views
Illumina annotation problem - illuminaHumanv2GENENAME
GO illuminaHumanv2 GO illuminaHumanv2
updated 17.1 years ago by ▴ 280 • written 17.1 years ago by ▴ 20
0
votes
1
reply
1.1k
views
Agilent annotation package 4122a vs 4122f
Annotation mgug4122a Annotation mgug4122a
updated 17.1 years ago by ★ 1.3k • written 17.1 years ago by ▴ 20
0
votes
1
reply
725
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help about hybirization data of Illumina BeadArray Genotyping Chip
beadarray beadarray
updated 17.1 years ago by 21k • written 17.1 years ago by ▴ 450
0
votes
6
replies
1.8k
views
Probe IDs VS Probeset IDs in Yeast2 annotation
yeast2 probe yeast2 probe
updated 17.1 years ago by 68k • written 17.1 years ago by ▴ 70
0
votes
4
replies
1.6k
views
Multiple test question in micrarray- FDR
GO Preprocessing GO Preprocessing
updated 17.1 years ago by ▴ 220 • written 17.1 years ago by ★ 6.0k
0
votes
3
replies
3.1k
views
using biomaRt to find all genes with kinase activity (and perhaps a Gene Ontology question too)
GO GO
updated 17.1 years ago by 68k • written 17.1 years ago by ▴ 350
46,725 results • Page 728 of 935
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Answer: Incosistencies in buildSNNGraph() function by stephengriffin04 • 0
Thank you for shedding light on the inconsistencies in the `buildSNNGraph()` function. It's crucial for users to address these issues as th…
Answer: A problem occurs when running the monocle2 by stephengriffin04 • 0
I totally feel you on the monocle2 issues! I had a similar run-in with unexpected errors last week that had me pulling my hair out. Did you…
Answer: limpa-blank normalization and Spectronaut's PTM stoichiometry by Gordon Smyth 53k
limpa reads standard feature-level output from Spectronaut. You do not need to make any changes to the output before reading it into limpa.…
Comment: Question about the filterByExpr function inputs in edgeR by mohammedtoufiq91 ▴ 10
@gordonsmyth Noted, thank you very much.
Comment: Question about the filterByExpr function inputs in edgeR by Gordon Smyth 53k
Regarding edgeR v4 filtering, I didn't mention anything about a minimum count of 10 but rather said "a positive count". So a minimalistic f…
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Comment: Question about the filterByExpr function inputs in edgeR
Answer: Question about the filterByExpr function inputs in edgeR
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