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1.3k
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lmFit Error: "comparison of these types is not implemented"
Microarray Microarray
18.2 years ago Martin Morgan 25k
0
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1
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743
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Error: could not find function "normaliseIllumina" [beadarray package]
updated 18.2 years ago by ▴ 460 • written 18.2 years ago by ▴ 320
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creating expression set
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modify CDF file for array study
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updated 18.2 years ago by ▴ 120 • written 18.2 years ago by ▴ 10
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880
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question regarding .632plus error rate estimator in ipred package
updated 18.2 years ago by ▴ 70 • written 18.2 years ago by ▴ 820
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BMEI 2008, Sanya, China: Deadline 10 November
18.2 years ago fu. qi.lai ▴ 10
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Plotting question: how to plot SNP location data?
SNP SNP
18.2 years ago Lauri.Nikkinen@veripalvelu.fi ▴ 20
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339
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I played with this for hours
18.2 years ago michel.pichon@hkusua.hku.hk ▴ 10
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GeneNet
GeneTS convert GeneTS convert
18.2 years ago Narinder Singh Sahni ▴ 50
0
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898
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re About ndups error chol(V)
18.2 years ago 赵烨 ▴ 20
0
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1
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MaSigPro
maSigPro maSigPro
updated 18.2 years ago by ▴ 90 • written 18.2 years ago by ▴ 50
0
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1
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1.1k
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Limma: eBayes makes p-values larger
Cancer multtest limma Cancer multtest limma
updated 18.2 years ago by 68k • written 18.2 years ago by ★ 1.9k
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About ndups error chol(V)
Microarray limma oligo Microarray limma oligo
18.2 years ago Gordon Smyth 53k
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Is a number within a set of ranges?
Cancer Cancer
18.2 years ago Daniel Brewer ★ 1.9k
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Plotting question: how to plot SNP location data?
SNP SNP
updated 18.2 years ago by ★ 1.7k • written 18.2 years ago by ▴ 20
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makePDpackage: Problem loading PD package in, oligo:read.celfiles function
cdf oligo cdf oligo
18.2 years ago Matt Settles ▴ 10
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0
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710
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Certain student loans eradicated
18.2 years ago Marilyn ▴ 10
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when to impute the missing value?
impute pcaMethods impute pcaMethods
18.2 years ago De-Jian ZHAO ▴ 240
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limma eBayes() produces NA in fit$F.p.value
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18.2 years ago De-Jian ZHAO ▴ 240
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contrasts in limma and missing values
limma limma
18.2 years ago Hans-Ulrich Klein ▴ 330
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About ndups error chol(V)
18.2 years ago 赵烨 ▴ 20
0
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11
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print layout for Agilent data?
limma limma
updated 18.2 years ago by ▴ 60 • written 18.2 years ago by ▴ 890
0
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0
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447
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makePDpackage: Problem loading PD package in oligo: read.celfiles function
18.2 years ago Gayla Olbricht ▴ 60
0
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1
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457
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Summarization methods for affy genechip expression data
updated 18.2 years ago by ▴ 730 • written 18.2 years ago by ▴ 20
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0
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364
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Problems with the spot quality weight with limma and ImaGene
18.2 years ago Laura Miozzi ▴ 10
0
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0
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limma block design
limma limma
18.2 years ago Mayra Eduardoff ▴ 30
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2
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Expression levels of individual affymetrix probes
qPCR probe qPCR probe
updated 18.2 years ago by 68k • written 18.2 years ago by ▴ 410
0
votes
1
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891
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probelm of column names when using biomaRt
updated 18.2 years ago by ▴ 500 • written 18.2 years ago by ▴ 450
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5
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lumi: how is the controlData to be read and used?
probe lumi probe lumi
updated 18.2 years ago by 53k • written 18.2 years ago by ★ 1.2k
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VSN, RMA, dCHIP, etc....
Normalization Normalization
updated 18.2 years ago by ★ 13k • written 18.3 years ago by ▴ 50
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lumi: how is the controlData to be read and used?
probe lumi probe lumi
18.2 years ago Gordon Smyth 53k
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lumi::lumiR parseColumnName behaves unexpectedly
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18.2 years ago Gordon Smyth 53k
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669
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retrieving SNP names for MM probes using oligo
updated 18.2 years ago by ★ 4.3k • written 18.2 years ago by ▴ 30
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0
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duplicateCorrelation dye-swap technical replicates
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18.2 years ago Gordon Smyth 53k
0
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0
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automating makeContrasts call in limma
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18.2 years ago Gordon Smyth 53k
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18.2 years ago Thomas Girke ★ 1.7k
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3
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semi-supervised clustering
updated 18.2 years ago by ▴ 30 • written 18.2 years ago by ★ 1.1k
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lumi: LumiBatch slots don't match documentation
lumi
18.2 years ago • updated 7 weeks ago Gordon Smyth 53k
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14
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GOStats/RBGL installation error
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updated 18.2 years ago by ▴ 170 • written 18.2 years ago by ▴ 260
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suppress messages in rma
updated 18.2 years ago by 25k • written 18.2 years ago by ▴ 510
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4
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2.6k
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How to create nested data frames
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18.2 years ago Ana Conesa ▴ 130
0
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Arguments for normalizewithinarrays (Limma)
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18.2 years ago Gordon Smyth 53k
0
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0
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duplicateCorrelation dye-swap technical replicates
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18.2 years ago Roberta Sirovich ▴ 10
0
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1
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501
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Arguments for normalizewithinarrays (Limma)
updated 18.2 years ago by ★ 1.9k • written 18.2 years ago by ▴ 250
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3
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getGene type not recognized
18.2 years ago John Lande ▴ 280
0
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0
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automating makeContrasts call in limma
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18.2 years ago Amin Moghaddasi ▴ 130
0
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0
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ABarray
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18.2 years ago Sabah Khalid ▴ 10
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2
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900
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Extracting data sub set from loaded data.
18.2 years ago elliot harrison ▴ 230
0
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0
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726
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Short Course in Seattle
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18.2 years ago rgentleman ★ 5.5k
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error message in gcrma
gcrma gcrma
18.2 years ago Yan Zhang ▴ 130
46,712 results • Page 773 of 935
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Comment: Opportunity to host EuroBioC2026 Preconference workshops! by TikTsokaas33ocissalpc • 0
Thank you for sharing the EuroBioC2026 workshop opportunity. I m interested in hosting a hands on session teaching reproducible data analys…
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Nope I don't mind haha! Anyway thanks so much! Thats super kind of you!
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Hi Andrew, We don't have that much experience combining different datasets with limpa yet, but my feeling is that the same DPC should be u…
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Thank you @seandavi for your feedback. I followed your recommendations and generated a [pull request][1] including the fix for this issue…
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Hope you don't mind I am not Johannes... ;-) Note that you nowadays can generate these yourselves using the `docker` image Johannes made av…
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