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Dario Strbenac
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8 days ago • updated 5 days ago
fernanda.backsouza
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updated 6 days ago by
Guangchuang Yu
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written 14 months ago by
ruiqi.li
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Answer: Version 3.15 S4Vectors packages are missing
by
shepherl
3.8k
It is missing because that package did not have any updates in the release except for the initial version. The archive directory holds prev…
Comment: putting my own expression data in deseq2
by
ATpoint
★
4.1k
> directly from GEOquery
I can tell you that GEOquery retrieves array data not appropriate for DESeq2. For anything else make your questi…
Comment: Assist me in determining whether the analysis process using the limma package ha
by
SSSJec
•
0
Thanks for your reply.
I understand the principle of adjusted P-values, but I still want to address that issue.
The description of the G…
Comment: Why p value inconsistent when using different number of pathway score?
by
Gordon Smyth
50k
Just a note that fgsea is not classical GSEA. The classical GSEA as described in the Subramanian paper and other papers from the Broad Inst…
Comment: Perform gene set enrichment analysis using fgsea on two conditions that don't ha
by
Chris
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0
Thank you! The resource I use may mispresent the requirement input of fgsea.
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