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Aspli
•
reset
0
votes
0
replies
105
views
I am trying to detect alternative splicing.
ASpli
26 days ago
Sebashish
• 0
0
votes
0
replies
256
views
Error in set(x, j = name, value = value) : Supplied 52 items to be assigned to 55 items of column 'locus'. If you wish to 'recycle' the RHS please…
ASpli
11 weeks ago
vipul14
• 0
5
votes
6
replies
871
views
ASpli checks fail on Linux due to missing dependency to statmod
ASpli
updated 9 months ago by
Gordon Smyth
50k • written 9 months ago by
martin.grigorov
▴ 10
0
votes
1
reply
668
views
Splicing analysis with ASpli package gives an error when I use binGenome function.
S4Vectors
Aspli
updated 15 months ago by
Sophie
• 0 • written 15 months ago by
salvocomplicazioni1
• 0
0
votes
3
replies
3.4k
views
ASpli: Error in h(simpleError(msg, call)) : error in evaluating the argument 'x' in selecting a method for function 'sort': 'start' or 'end' canno…
ASpli
updated 8 months ago by
andresrabinovich
• 0 • written 19 months ago by
thithusuong.nguyen
• 0
0
votes
0
replies
622
views
ASpli package gives an error in jCounts function and suggest a parameter change in granges()
ASpli
alterna
AlternativeSplicing
2.3 years ago
hamza_karakurt
▴ 50
6
votes
10
replies
1.7k
views
ASpli: jCounts() Error in av[at] <- a[at] : NAs are not allowed in subscripted assignments
ASpli
updated 2.7 years ago by
Ines
• 0 • written 3.0 years ago by
Emma
▴ 20
0
votes
1
reply
1.6k
views
ASpli: Error in h(simpleError(msg, call))
ASpli
updated 22 months ago by
lincango_marco
• 0 • written 2.7 years ago by
Dmitri
• 0
1
vote
3
replies
1.0k
views
ASpli error message
ASpli
updated 2.3 years ago by
hamza_karakurt
▴ 50 • written 3.1 years ago by
stephen66
▴ 50
1
vote
11
replies
2.0k
views
Aspli: error with gbCounts
Aspli
ASpli
3.2 years ago • updated 3.1 years ago
jbono
▴ 10
0
votes
1
reply
806
views
ASpli package function plotGenomicRegions fails in windows
ASpli
plotGenomicRegions
updated 3.7 years ago by
emancini
▴ 50 • written 4.8 years ago by
mgdrnl
• 0
0
votes
1
reply
606
views
function plotgenomicregions does not appear in the aspli package installed in windows
software error
aspli
plotgenomicregions
windows
4.0 years ago
joanmarquez21
• 0
3
votes
2
replies
1.0k
views
ASpli readCounts never ends!
aspli
readCounts
rna-seq
alternative splicing
AS
5.3 years ago
fernandalpcosta
▴ 10
0
votes
0
replies
900
views
ASpli AsDiscover error
R
alternative splicing
ASpli
AsDiscover
5.4 years ago
abdul rawoof
▴ 60
0
votes
0
replies
958
views
ASpli Package: Problem with readCounts() function, no Junctions analysed.
rnaseq
alternative splicing
ASpli
5.5 years ago
nicolas.guyon2
• 0
0
votes
0
replies
823
views
ASPLI (RNAseq AS) R package error
rnaseq
ASPLI
5.9 years ago
dina.hesham139
• 0
0
votes
0
replies
1.1k
views
Running ASpli on R results in "Error: vector memory exhausted (limit reached?)"
aspli
rstudio
5.9 years ago
arphatak
• 0
0
votes
1
reply
908
views
Splicing analysis with ASpli
ASpli
updated 6.2 years ago by
Dario Strbenac
★ 1.5k • written 6.2 years ago by
jovel_juan
▴ 30
2
votes
2
replies
1.4k
views
ASpli ERROR during the counting step
ASpli
rnaseq
updated 6.2 years ago by
hojka.anna
▴ 10 • written 6.5 years ago by
daniele.ottaviani
▴ 10
19 results • Page
1 of 1
Recent ...
Replies
Comment: Ensembl plants at annotationHub?
by
Daniele
• 0
Dear Johannes, Would it be possible to create the EnsDb for Triticum aestivum (IWGSC)? Thank you very much, Daniele
Comment: How can I create a eigencorplot of pca created from deseq2 object with PCAtools
by
BioinfGuru
▴ 30
Figured it out with ?eigencorplot, thanks Michael. I was trying to pass 10 PCs when I only had 8, and I was including metadata columns that…
Answer: DECIPHER::idTaxa - broken link to download GTDB r220 (modified) trainig set
by
makala
• 0
Thanks a lot!
Comment: DECIPHER::idTaxa - broken link to download GTDB r220 (modified) trainig set
by
Erik Wright
▴ 150
Thanks for notifying us of this broken link. It should be fixed on the Downloads page now. [1] [1]: http://www2.decipher.codes/Classificat…
Answer: Importing a GraphNEL into Cytoscape with RCy3 with error: "Error in cyrestPUT(pa
by
Matthew Thornton
▴ 360
So it turns out that if the count and the size are the same in 'GOstats", the odds ratio is 'inf'. These are causing the issue. Thank you!!
Votes
Comment: How can I create a eigencorplot of pca created from deseq2 object with PCAtools
Answer: Importing a GraphNEL into Cytoscape with RCy3 with error: "Error in cyrestPUT(pa
Answer: Importing a GraphNEL into Cytoscape with RCy3 with error: "Error in cyrestPUT(pa
Rsubread counting peaks ATACseq
Comment: Can DESeq2 rlog normalized matrix reflects time course result directly?
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