Bioconductor BSGenome

Showing : BSGenome • reset

vote

replies

777

views

BSgenome

updated 3 months ago by James W. MacDonald 66k • written 3 months ago by Kate • 0

vote

replies

622

views

SNPlocs BSgenome

written 7 months ago by Stevie Pederson • 0

votes

replies

573

views

OrgDb BSgenome

7 months ago • updated 3 months ago mat149 ▴ 70

votes

replies

1.1k

views

BSgenomeForge BSgenome

updated 11 months ago by James W. MacDonald 66k • written 11 months ago by kyliecode • 0

votes

replies

880

views

BSgenome

updated 4 months ago by eviatar.weizman • 0 • written 2.1 years ago by remerandmaxence ▴ 10

votes

replies

732

views

intron BSgenome.Hsapiens.UCSC.hg38 BSgenome

updated 11 months ago by ATpoint ★ 4.2k • written 11 months ago by Lillian • 0

vote

replies

784

views

bsgenome GenomicFeatures package

updated 12 months ago by Hervé Pagès 16k • written 12 months ago by Manish • 0

7 results • Page 1 of 1

Recent ...

Replies

Comment: Error in gseDO function by Javier • 0

Thank you for your answer! The thing is I'm working with 12 genes (I did also some targeted cholesterol efflux-related genes, but for sha…

Comment: Why is longestConsecutive() depreceated in version 2.72 (BioC version 3.19)? by Ali Osman • 0

Thanks for your response and suggestions @atpoint ! I think implementation of the function is not a problem (I already have some options an…

Comment: DEXSeq errors "Error in scan( line ... did not have 3 elements" and "Error in FU by Marek Gierlinski ▴ 30

Two years on and the issue is still there. Thank you Arthur for the solution!

Comment: Cannot install oligo on Fedora by mbassal • 0

so whats the solution for this error?

Comment: Why is longestConsecutive() depreceated in version 2.72 (BioC version 3.19)? by ATpoint ★ 4.2k

I don't have an answer to the "why" but maybe a simple reimplemention will do: ```r seqs <- c("ATCATCGTATCAAAGTC", "AAAACGTATCAAAGTC", "TG…

Votes

Answer: Error in gseDO function

Comment: what the test method for enrichGO in clusterProfiler?

A: Comparison between two different group's pathway analysis results

DiffBind Batch Effect

A: DiffBind Batch Effect

Awards • All

Popular Question to Robert Castelo ★ 3.3k