Showing : Biobase • reset
0
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4
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2.2k
views
[R-SIG-Mac] Mac os x graphviz-Rgraphviz problem
Biobase annotate geneplotter graph Rgraphviz BUS Biobase annotate geneplotter graph BUS
updated 18.8 years ago by ★ 7.4k • written 18.8 years ago by ★ 6.5k
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2
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1.7k
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OSX binary graphviz, binary Rgraphviz install problems
Biobase graph Rgraphviz Biobase graph Rgraphviz
updated 18.8 years ago by ★ 7.4k • written 18.8 years ago by ▴ 60
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0
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1.5k
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Mac os x graphviz-Rgraphviz problem
Biobase annotate graph Rgraphviz BUS Biobase annotate graph Rgraphviz BUS
18.8 years ago Gavai, Anand ▴ 40
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0
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1.1k
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Announcement: BioConductor Developer Workshop
Annotation Biobase Annotation Biobase
18.8 years ago Darlene Goldstein ▴ 230
0
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3
replies
1.6k
views
GOstats hyperGTest question
Biobase annotate genefilter multtest graph Biobase annotate genefilter multtest graph
updated 18.8 years ago by ★ 7.4k • written 18.8 years ago by ▴ 80
0
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0
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761
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beadarray: problem with reading in Bead Summary Data
Biobase affy affyio beadarray Biobase affy affyio beadarray
18.9 years ago Perry Moerland ▴ 130
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0
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1.4k
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flagging spots in marray
aCGH Microarray Normalization GO Cancer Biobase annotate genefilter affy affydata limma
18.9 years ago Gordon Smyth 53k
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2
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1.1k
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Developer Meeting in Lausanne CH 4.+5. April 2007
Biobase Biobase
updated 18.9 years ago by ▴ 180 • written 18.9 years ago by ★ 13k
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11
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3.4k
views
trouble hacking plotPCA
GO Survival Biobase genefilter affy affydata graph limma gcrma matchprobes affyPLM RBGL
updated 18.9 years ago by ▴ 10 • written 18.9 years ago by ★ 2.2k
0
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2
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1.2k
views
R-2.4.0/bioconductor/darwin kernel version problem
Biobase affy Biobase affy
updated 18.9 years ago by ★ 7.4k • written 18.9 years ago by ▴ 70
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votes
1
reply
3.2k
views
ReadAffy can not find function read.AnnotatedDataFrame
Biobase genefilter affydata limma simpleaffy hopach affyio Biobase genefilter affydata
updated 19.0 years ago by 68k • written 19.0 years ago by ▴ 510
0
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5
replies
2.2k
views
error coercing an exprSet to ExpressionSet
GO cdf Biobase annotate multtest affy limma RBGL GOstats Category affycoretools GO cdf
updated 19.0 years ago by ★ 7.4k • written 19.0 years ago by ▴ 890
0
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1
reply
1.5k
views
warning from make.cdf.package - FYI
GO Survival cdf Biobase annotate genefilter graph makecdfenv limma gcrma matchprobes GO
updated 19.0 years ago by 68k • written 19.0 years ago by ★ 2.2k
0
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5
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2.2k
views
Importing CDF file for custom array using makecdfenv
Microarray GO Survival Cancer cdf Biobase annotate genefilter affy graph makecdfenv GO
updated 19.0 years ago by ▴ 20 • written 19.0 years ago by ★ 2.2k
0
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1
reply
1.7k
views
[Bioc-devel] SNPscan -> SNPchip
SNP Annotation Yeast Biobase SNPchip SNP Annotation Yeast Biobase SNPchip
updated 19.0 years ago by ▴ 250 • written 19.0 years ago by ▴ 170
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0
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1.5k
views
problems with Affy vignette and affybatch objects
GO Survival cdf Biobase annotate genefilter multtest affy affydata graph limma gcrma
19.0 years ago Martin Morgan 25k
0
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4
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1.6k
views
problems with Affy vignette and affybatch objects
GO Survival cdf Biobase annotate genefilter multtest reposTools affy affydata graph GO
updated 19.0 years ago by 25k • written 19.0 years ago by ★ 2.2k
0
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2
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1.4k
views
beadarray example data problem
Biobase affy affyio beadarray Biobase affy affyio beadarray
19.1 years ago • updated 19.0 years ago Keith Satterley ▴ 450
0
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3
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1.4k
views
beadarray example data problem 2
Biobase affy affyio beadarray Biobase affy affyio beadarray
19.0 years ago Martin Morgan 25k
0
votes
0
replies
1.2k
views
Error in xval: No Direct or Inherited Method for this call
Biobase MLInterfaces Biobase MLInterfaces
19.1 years ago mpg33@drexel.edu ▴ 90
0
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0
replies
1.4k
views
Error in xval: No Direct or Inherited Method for this call
Survival Biobase genefilter MLInterfaces Survival Biobase genefilter MLInterfaces
19.1 years ago Martin Morgan 25k
0
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0
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958
views
error when restoring workspace containing exprSet objects
Biobase Biobase
19.2 years ago Christos Hatzis ▴ 90
0
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0
replies
634
views
convert library for microarrays data
Biobase Biobase
19.2 years ago Seth Falcon ★ 7.4k
0
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2
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1.4k
views
error with GOHyperG
drosophila2 cdf Biobase annotate genefilter multtest RBGL GOstats drosophila2 cdf RBGL
updated 19.2 years ago by ★ 7.4k • written 19.2 years ago by ▴ 10
0
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1
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1.1k
views
qc
Survival Biobase genefilter affy affydata affyPLM simpleaffy affyio Survival Biobase
updated 19.2 years ago by 68k • written 19.2 years ago by ▴ 10
0
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5
replies
2.3k
views
RMA and justRMA error
Cancer cdf Biobase affy gcrma affyio Cancer cdf Biobase affy gcrma affyio
19.2 years ago Aedin Culhane ▴ 510
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1
reply
1.5k
views
[R] problem loading affycoretools - solved!
Biobase Ruuid genefilter multtest graph limma gcrma matchprobes affyPLM RBGL simpleaffy
updated 19.3 years ago by ★ 7.4k • written 19.3 years ago by ★ 2.2k
0
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2
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1.8k
views
problem loading affycoretools
Survival hgu95av2 Biobase Ruuid annotate genefilter multtest affydata graph limma gcrma
19.3 years ago Jenny Drnevich ★ 2.2k
0
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0
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1.4k
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how to retrieve data in list using getBM in biomaRt package?
Microarray GO Cancer probe Biobase annotate limma biomaRt Microarray GO Cancer probe
19.3 years ago James W. MacDonald 68k
0
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1
reply
1.3k
views
Too many open files error with groupName = "all" in biocLite() call on Apple OS X
Cancer Breast Biobase AnnBuilder xcms Cancer Breast Biobase AnnBuilder xcms
updated 19.3 years ago by ★ 7.4k • written 19.3 years ago by ▴ 310
0
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5
replies
2.0k
views
Errors using biocLite on Apple OS X
GUI Cancer Breast Biobase GUI Cancer Breast Biobase
19.3 years ago Steven McKinney ▴ 310
0
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6
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1.8k
views
Error loading, on Bioconductor 1.8, exprSet generated with bioconductor 1.7
Biobase affy Biobase affy
updated 19.4 years ago by 25k • written 19.4 years ago by ▴ 500
0
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0
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1.2k
views
Why mm's changing after bg.adjust.gcrma?
drosgenome1 cdf Biobase reposTools affy gcrma affyPLM simpleaffy affyQCReport affyio cdf
19.5 years ago Jenny Drnevich ★ 2.2k
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4
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2.3k
views
Failure to load Biobase
Biobase affy limma gcrma matchprobes affyio Biobase affy limma gcrma matchprobes affyio
updated 19.5 years ago by 25k • written 19.5 years ago by ★ 2.2k
0
votes
3
replies
1.6k
views
Newbie 'rflowcyt' question; problem loading facscan256.fcs
Biobase rflowcyt Biobase rflowcyt
updated 19.5 years ago by ▴ 140 • written 19.5 years ago by ▴ 80
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4
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1.6k
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Communicating gene-probe relationships to sam
SNP Biobase siggenes SNP Biobase siggenes
19.5 years ago Charles Crane ▴ 30
0
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0
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661
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Sam always wants more observations
probe Biobase affy affyPLM probe Biobase affy affyPLM
19.5 years ago Charles Crane ▴ 30
0
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0
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1.2k
views
limma, marray and Agilent 44K
Normalization Biobase vsn limma marray Normalization Biobase vsn limma marray
19.6 years ago Nataliya Yeremenko ▴ 100
0
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0
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1.1k
views
Limma, marray and Agilent 44K
Normalization Biobase vsn limma marray convert Normalization Biobase vsn limma marray
19.6 years ago Nataliya Yeremenko ▴ 10
0
votes
3
replies
1.8k
views
error in mas5calls() for soybean chip
Survival hu6800 cdf probe Biobase genefilter reposTools affy affydata limma gcrma made4
updated 19.6 years ago by ▴ 70 • written 19.6 years ago by ★ 2.2k
0
votes
0
replies
955
views
lost inherent methods of hist() for AffyBatch objects
cdf Biobase affy cdf Biobase affy
19.7 years ago Jenny Drnevich ★ 2.2k
0
votes
1
reply
910
views
C entry point "ReadHeader" not in DLL for package "affy"
Biobase affy affyio Biobase affy affyio
updated 19.7 years ago by ★ 1.2k • written 19.7 years ago by ▴ 890
0
votes
1
reply
1.2k
views
GEOquery & GDS2eSet error
Annotation Cancer Breast Biobase affy limma AnnBuilder GEOquery Annotation Cancer Breast
updated 19.7 years ago by 21k • written 19.7 years ago by ▴ 300
0
votes
2
replies
1.5k
views
continued problems with ReadAffy
Biobase affy Biobase affy
19.8 years ago Kimpel, Mark W ▴ 890
0
votes
0
replies
789
views
problems with GO package data
GO Cancer hgu95av2 probe Biobase annotate genefilter multtest graph GOstats GO Cancer
19.8 years ago Yu-An Dong ▴ 40
0
votes
0
replies
597
views
installation problem / CRAN.packages deprecatedwarningmessage
Biobase Biobase
19.8 years ago Belooussov, Anton ▴ 50
0
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1
reply
4.9k
views
R package Installation Errors
Survival Biobase affy Survival Biobase affy
updated 19.8 years ago by 25k • written 19.8 years ago by ▴ 60
0
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0
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1.1k
views
missing function in duplicateCorrelation?
Biobase affy affydata limma affyPLM Biobase affy affydata limma affyPLM
19.9 years ago Jenny Drnevich ★ 2.2k
0
votes
3
replies
1.8k
views
bugs in arrayQuality and marray
Normalization Biobase hexbin arrayQuality marray Normalization Biobase hexbin arrayQuality
20.0 years ago • updated 19.9 years ago Paquet, Agnes ▴ 500
0
votes
2
replies
1.2k
views
bug in overview function of made4
Biobase affy marray convert made4 Biobase affy marray convert made4
updated 19.9 years ago by ▴ 510 • written 20.0 years ago by ★ 2.2k
288 results • Page 4 of 6
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Comment: Save the Date: BioC2026 by eja.gsssssswwse.r.m • 0
Que notícia incrivel sobre o BioC2026 Para quem gosta de aproveitar o conteudo online, também e possvel Baixar [snaptube versão antiga][1] …
Comment: Ensembl 115 has been released! by eja.gsssssswwse.r.m • 0
Keeping up with Ensembls latest release ensures access to cutting-edge genomic information. For those balancing research and leisure, a mob…
Answer: After running samtools, the featureCounts command crashed. by Kevin Blighe ★ 4.0k
Hi Rui Tang, The "buffer overflow detected" error in featureCounts usually stems from a corrupted or malformed GTF file, often due to tr…
Answer: Problem with the TMB plot by Kevin Blighe ★ 4.0k
Hi, The linear TMB plot with no clustering suggests your variant calls may lack sample-specific discrimination, likely due to filtering ap…
Answer: gene Set with high AUC score but no cells assigned to cell type by Kevin Blighe ★ 4.0k
Hi, You have correctly identified the issue: AUCell's automatic threshold selection is conservative by design, aiming for specificity to…
Votes
Answer: DESeq2 design for haplotype MPRA
Answer: Failure to download resources (MeSHDb) from AnnotationHub
Answer: Failure to download resources (MeSHDb) from AnnotationHub
Answer: Suppress warning in RHDF5 write
Answer: Suppress warning in RHDF5 write
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