Showing : Biobase • reset
0
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4
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2.4k
views
[R-SIG-Mac] Mac os x graphviz-Rgraphviz problem
Biobase annotate geneplotter graph Rgraphviz BUS Biobase annotate geneplotter graph BUS
updated 19.1 years ago by ★ 7.4k • written 19.1 years ago by ★ 6.5k
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2
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1.7k
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OSX binary graphviz, binary Rgraphviz install problems
Biobase graph Rgraphviz Biobase graph Rgraphviz
updated 19.1 years ago by ★ 7.4k • written 19.1 years ago by ▴ 60
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0
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1.5k
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Mac os x graphviz-Rgraphviz problem
Biobase annotate graph Rgraphviz BUS Biobase annotate graph Rgraphviz BUS
19.1 years ago Gavai, Anand ▴ 40
0
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0
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1.1k
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Announcement: BioConductor Developer Workshop
Annotation Biobase Annotation Biobase
19.1 years ago Darlene Goldstein ▴ 230
0
votes
3
replies
1.7k
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GOstats hyperGTest question
Biobase annotate genefilter multtest graph Biobase annotate genefilter multtest graph
updated 19.1 years ago by ★ 7.4k • written 19.1 years ago by ▴ 80
0
votes
0
replies
794
views
beadarray: problem with reading in Bead Summary Data
Biobase affy affyio beadarray Biobase affy affyio beadarray
19.2 years ago Perry Moerland ▴ 130
0
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0
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1.5k
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flagging spots in marray
aCGH Microarray Normalization GO Cancer Biobase annotate genefilter affy affydata limma
19.2 years ago Gordon Smyth 53k
0
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2
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1.2k
views
Developer Meeting in Lausanne CH 4.+5. April 2007
Biobase Biobase
updated 19.2 years ago by ▴ 180 • written 19.2 years ago by ★ 13k
0
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11
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3.6k
views
trouble hacking plotPCA
GO Survival Biobase genefilter affy affydata graph limma gcrma matchprobes affyPLM RBGL
updated 19.2 years ago by ▴ 10 • written 19.2 years ago by ★ 2.2k
0
votes
2
replies
1.3k
views
R-2.4.0/bioconductor/darwin kernel version problem
Biobase affy Biobase affy
updated 19.2 years ago by ★ 7.4k • written 19.2 years ago by ▴ 70
0
votes
1
reply
3.3k
views
ReadAffy can not find function read.AnnotatedDataFrame
Biobase genefilter affydata limma simpleaffy hopach affyio Biobase genefilter affydata
updated 19.3 years ago by 68k • written 19.3 years ago by ▴ 510
0
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5
replies
2.4k
views
error coercing an exprSet to ExpressionSet
GO cdf Biobase annotate multtest affy limma RBGL GOstats Category affycoretools GO cdf
updated 19.3 years ago by ★ 7.4k • written 19.3 years ago by ▴ 890
0
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1
reply
1.5k
views
warning from make.cdf.package - FYI
GO Survival cdf Biobase annotate genefilter graph makecdfenv limma gcrma matchprobes GO
updated 19.3 years ago by 68k • written 19.3 years ago by ★ 2.2k
0
votes
5
replies
2.8k
views
Importing CDF file for custom array using makecdfenv
Microarray GO Survival Cancer cdf Biobase annotate genefilter affy graph makecdfenv GO
updated 19.3 years ago by ▴ 20 • written 19.3 years ago by ★ 2.2k
0
votes
1
reply
1.7k
views
[Bioc-devel] SNPscan -> SNPchip
SNP Annotation Yeast Biobase SNPchip SNP Annotation Yeast Biobase SNPchip
updated 19.3 years ago by ▴ 250 • written 19.3 years ago by ▴ 170
0
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0
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1.5k
views
problems with Affy vignette and affybatch objects
GO Survival cdf Biobase annotate genefilter multtest affy affydata graph limma gcrma
19.3 years ago Martin Morgan 25k
0
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4
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1.7k
views
problems with Affy vignette and affybatch objects
GO Survival cdf Biobase annotate genefilter multtest reposTools affy affydata graph GO
updated 19.4 years ago by 25k • written 19.4 years ago by ★ 2.2k
0
votes
2
replies
1.5k
views
beadarray example data problem
Biobase affy affyio beadarray Biobase affy affyio beadarray
19.4 years ago Keith Satterley ▴ 450
0
votes
3
replies
1.4k
views
beadarray example data problem 2
Biobase affy affyio beadarray Biobase affy affyio beadarray
19.4 years ago Martin Morgan 25k
0
votes
0
replies
1.2k
views
Error in xval: No Direct or Inherited Method for this call
Biobase MLInterfaces Biobase MLInterfaces
19.4 years ago mpg33@drexel.edu ▴ 90
0
votes
0
replies
1.5k
views
Error in xval: No Direct or Inherited Method for this call
Survival Biobase genefilter MLInterfaces Survival Biobase genefilter MLInterfaces
19.4 years ago Martin Morgan 25k
0
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0
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984
views
error when restoring workspace containing exprSet objects
Biobase Biobase
19.5 years ago Christos Hatzis ▴ 90
0
votes
0
replies
672
views
convert library for microarrays data
Biobase Biobase
19.5 years ago Seth Falcon ★ 7.4k
0
votes
2
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1.4k
views
error with GOHyperG
drosophila2 cdf Biobase annotate genefilter multtest RBGL GOstats drosophila2 cdf RBGL
updated 19.6 years ago by ★ 7.4k • written 19.6 years ago by ▴ 10
0
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1
reply
1.1k
views
qc
Survival Biobase genefilter affy affydata affyPLM simpleaffy affyio Survival Biobase
updated 19.6 years ago by 68k • written 19.6 years ago by ▴ 10
0
votes
5
replies
2.4k
views
RMA and justRMA error
Cancer cdf Biobase affy gcrma affyio Cancer cdf Biobase affy gcrma affyio
19.6 years ago Aedin Culhane ▴ 510
0
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1
reply
1.6k
views
[R] problem loading affycoretools - solved!
Biobase Ruuid genefilter multtest graph limma gcrma matchprobes affyPLM RBGL simpleaffy
updated 19.6 years ago by ★ 7.4k • written 19.6 years ago by ★ 2.2k
0
votes
2
replies
1.9k
views
problem loading affycoretools
Survival hgu95av2 Biobase Ruuid annotate genefilter multtest affydata graph limma gcrma
19.6 years ago Jenny Drnevich ★ 2.2k
0
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0
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1.5k
views
how to retrieve data in list using getBM in biomaRt package?
Microarray GO Cancer probe Biobase annotate limma biomaRt Microarray GO Cancer probe
19.6 years ago James W. MacDonald 68k
0
votes
1
reply
1.3k
views
Too many open files error with groupName = "all" in biocLite() call on Apple OS X
Cancer Breast Biobase AnnBuilder xcms Cancer Breast Biobase AnnBuilder xcms
updated 19.6 years ago by ★ 7.4k • written 19.6 years ago by ▴ 310
0
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5
replies
2.1k
views
Errors using biocLite on Apple OS X
GUI Cancer Breast Biobase GUI Cancer Breast Biobase
19.6 years ago Steven McKinney ▴ 310
0
votes
6
replies
1.9k
views
Error loading, on Bioconductor 1.8, exprSet generated with bioconductor 1.7
Biobase affy Biobase affy
updated 19.7 years ago by 25k • written 19.7 years ago by ▴ 500
0
votes
0
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1.2k
views
Why mm's changing after bg.adjust.gcrma?
drosgenome1 cdf Biobase reposTools affy gcrma affyPLM simpleaffy affyQCReport affyio cdf
19.8 years ago Jenny Drnevich ★ 2.2k
0
votes
4
replies
2.4k
views
Failure to load Biobase
Biobase affy limma gcrma matchprobes affyio Biobase affy limma gcrma matchprobes affyio
updated 19.8 years ago by 25k • written 19.8 years ago by ★ 2.2k
0
votes
3
replies
1.6k
views
Newbie 'rflowcyt' question; problem loading facscan256.fcs
Biobase rflowcyt Biobase rflowcyt
updated 19.8 years ago by ▴ 140 • written 19.8 years ago by ▴ 80
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4
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1.7k
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Communicating gene-probe relationships to sam
SNP Biobase siggenes SNP Biobase siggenes
19.8 years ago Charles Crane ▴ 30
0
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0
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704
views
Sam always wants more observations
probe Biobase affy affyPLM probe Biobase affy affyPLM
19.8 years ago Charles Crane ▴ 30
0
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0
replies
1.2k
views
limma, marray and Agilent 44K
Normalization Biobase vsn limma marray Normalization Biobase vsn limma marray
19.9 years ago Nataliya Yeremenko ▴ 100
0
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0
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1.1k
views
Limma, marray and Agilent 44K
Normalization Biobase vsn limma marray convert Normalization Biobase vsn limma marray
19.9 years ago Nataliya Yeremenko ▴ 10
0
votes
3
replies
1.9k
views
error in mas5calls() for soybean chip
Survival hu6800 cdf probe Biobase genefilter reposTools affy affydata limma gcrma made4
updated 19.9 years ago by ▴ 70 • written 19.9 years ago by ★ 2.2k
0
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0
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1.0k
views
lost inherent methods of hist() for AffyBatch objects
cdf Biobase affy cdf Biobase affy
20.0 years ago Jenny Drnevich ★ 2.2k
0
votes
1
reply
961
views
C entry point "ReadHeader" not in DLL for package "affy"
Biobase affy affyio Biobase affy affyio
updated 20.0 years ago by ★ 1.2k • written 20.0 years ago by ▴ 890
0
votes
1
reply
1.3k
views
GEOquery & GDS2eSet error
Annotation Cancer Breast Biobase affy limma AnnBuilder GEOquery Annotation Cancer Breast
updated 20.1 years ago by 21k • written 20.1 years ago by ▴ 300
0
votes
2
replies
1.6k
views
continued problems with ReadAffy
Biobase affy Biobase affy
20.1 years ago Kimpel, Mark W ▴ 890
0
votes
0
replies
819
views
problems with GO package data
GO Cancer hgu95av2 probe Biobase annotate genefilter multtest graph GOstats GO Cancer
20.1 years ago Yu-An Dong ▴ 40
0
votes
0
replies
622
views
installation problem / CRAN.packages deprecatedwarningmessage
Biobase Biobase
20.1 years ago Belooussov, Anton ▴ 50
0
votes
1
reply
5.0k
views
R package Installation Errors
Survival Biobase affy Survival Biobase affy
updated 20.1 years ago by 25k • written 20.1 years ago by ▴ 60
0
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0
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1.2k
views
missing function in duplicateCorrelation?
Biobase affy affydata limma affyPLM Biobase affy affydata limma affyPLM
20.2 years ago Jenny Drnevich ★ 2.2k
0
votes
3
replies
1.9k
views
bugs in arrayQuality and marray
Normalization Biobase hexbin arrayQuality marray Normalization Biobase hexbin arrayQuality
20.3 years ago Paquet, Agnes ▴ 500
0
votes
2
replies
1.3k
views
bug in overview function of made4
Biobase affy marray convert made4 Biobase affy marray convert made4
updated 20.3 years ago by ▴ 510 • written 20.3 years ago by ★ 2.2k
288 results • Page 4 of 6
Recent ...
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Answer: Unable to find ENTREZ IDs by James W. MacDonald 68k
Those are the 'symbols', and are a concatenation of LOC and the NCBI Gene ID (what used to be called an Entrez Gene ID). As an example:http…
Answer: Inconsistencies between accessor functions for TxDb databases with selected seql by a2a2hd42aa • 0
Technical inconsistencies in database accessors can disrupt your workflow, but finding a reliable source to download online mobile games sh…
Comment: Can sample-level weights be used when analysing GSVA scores in limma? by A.Barden ▴ 20
Thanks both for this useful information.
Comment: Reproducibility of code in various Bioconductor versions by Gordon Smyth 53k
SNPlocs.Hsapiens.dbSNP155.GRCh38 is available for download from the same location as always. It has not changed since Bioc 3.20: Presumabl…
Comment: Changing multiple display parameters of a specific exon in GeneRegionTrack by a2a2hd42aa • 0
Similarly, for structural complexity in the [He777 Game][1] APK, having precise control over every detail is what makes a high-performance …
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Do I map probes to gene symbols BEFORE or AFTER differentially expressed gene analysis?
Answer: Can sample-level weights be used when analysing GSVA scores in limma?
Answer: Can sample-level weights be used when analysing GSVA scores in limma?
Comment: Can sample-level weights be used when analysing GSVA scores in limma?
Answer: Issue loading and downloading Bioconductor 3.22 packages after update
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