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Bioc
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can't update bioconductor 3.18
BioCor
bioc
BiocVersion
6 months ago
feifan
• 0
1
vote
2
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654
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News:
Win 1 of 50 free virtual registrations to BioC Asia 2022 (Dec 1-2, 2022)
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BioCAsia
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BioC
written 18 months ago by
Peter Hickey
▴ 740
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1
reply
821
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JAVA_HOME cannot be determined on Windows on Bioconductor platform report
bioc
Bioconductor
updated 2.6 years ago by
Hervé Pagès
16k • written 2.6 years ago by
cannin
▴ 20
0
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1
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1.9k
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Multiple R versions
R
bioc
updated 5.2 years ago by
Martin Morgan
25k • written 5.2 years ago by
pawan12394
• 0
0
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5
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1.7k
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BioC happening in 2018?
BioC
2018
Course
6.7 years ago
s.munster
▴ 40
0
votes
1
reply
1.6k
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Errors installing RforProteomics
Bioc
package installation
rforproteomics
updated 8.2 years ago by
Laurent Gatto
1.6k • written 8.2 years ago by
sarahgrogan
• 0
6 results • Page
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Comment: Why does GSEA on edgeR results for randomized samples give highly significant p-
by
Chris
• 0
Thanks Gordon for the advice! I ran fgsea, gsva and camera(), the most significant pathways are different. For the purpose of finding pathw…
Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package)
by
Michael Love
41k
Check the number of bootstrapped data per chromosome compared to the original, and then you can also look at its distribution. For this it'…
Comment: DNAString: Standard checksum function?
by
Henrik Bengtsson
★ 2.4k
For completeness: SEGUID v2 (https://www.seguid.org/), implemented in CRAN package **[seguid](https://cran.r-project.org/package=seguid)*…
Comment: fgsea significant result
by
Chris
• 0
Thanks ATpoint! Setting a fixed seed can reproduce the same result. However, if someone else analyze the same data with different seed, the…
Comment: SGSeq: moving toward diffex from SGSeq analysis
by
Sara
• 0
Thank you for your response. I have another question about saving the sgvc result as a CSV file. I would appreciate your help, please. ``` …
Votes
Answer: Why does GSEA on edgeR results for randomized samples give highly significant p-
Handling multiple differential expression comparisons
Answer: fgsea significant result
Answer: fgsea significant result
package goseq seems to be not available on the latest version of R
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