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Bioc
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can't update bioconductor 3.18
BioCor
bioc
BiocVersion
6 months ago
feifan
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1
vote
2
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643
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News:
Win 1 of 50 free virtual registrations to BioC Asia 2022 (Dec 1-2, 2022)
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BioC
written 17 months ago by
Peter Hickey
▴ 740
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1
reply
804
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JAVA_HOME cannot be determined on Windows on Bioconductor platform report
bioc
Bioconductor
updated 2.5 years ago by
Hervé Pagès
16k • written 2.5 years ago by
cannin
▴ 20
0
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1
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1.9k
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Multiple R versions
R
bioc
updated 5.2 years ago by
Martin Morgan
25k • written 5.2 years ago by
pawan12394
• 0
0
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5
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1.7k
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BioC happening in 2018?
BioC
2018
Course
6.7 years ago
s.munster
▴ 40
0
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1
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1.5k
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Errors installing RforProteomics
Bioc
package installation
rforproteomics
updated 8.1 years ago by
Laurent Gatto
1.6k • written 8.1 years ago by
sarahgrogan
• 0
6 results • Page
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Comment: Batch/method effect correction on a cohort of patients with RUVseq and DESeq2
by
James W. MacDonald
65k
Are you commenting on the OP's question, or adding a different question? If the latter, please start a new post rather than piggybacking on…
Answer: Math expression in shapeCustom legend in EnhancedVolcano
by
James W. MacDonald
65k
Use `bquote`. See section 4.6 in [the vignette][1]. [1]: https://bioconductor.org/packages/release/bioc/vignettes/EnhancedVolcano/in…
Comment: Batch/method effect correction on a cohort of patients with RUVseq and DESeq2
by
SamGG
▴ 350
I was thinking about removing unwanted variations at the sample level (ie a transformation shared across genes) not at the gene level. Corr…
Comment: Batch/method effect correction on a cohort of patients with RUVseq and DESeq2
by
James W. MacDonald
65k
That's an assumption used for normalization of a sample, not an assumption you can use for an individual model. We always normalize to atte…
Comment: Batch/method effect correction on a cohort of patients with RUVseq and DESeq2
by
SamGG
▴ 350
Is useless the assumption that the majority of genes have no variation in expression (bearing in mind that they are distributed over the en…
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biomaRt error: database disk image is malformed
Comment: biomaRt : No lock file for BiocFileCache
Answer: Cross-species analysis - how to compute the mid parent value?
Answer: Batch/method effect correction on a cohort of patients with RUVseq and DESeq2
Answer: Batch/method effect correction on a cohort of patients with RUVseq and DESeq2
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