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News: Save the Date Bioc2023!
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News: Last Week to Nominate for Bioc2023 Awards!
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News: Reminder: BioC2023 in-person registration closes 19th July!
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9 months ago Maria Doyle ▴ 70
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News: BioC2023 abstract submission is now open!
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News: May 31st is the last day to nominate for Bioc2023 Awards!
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News: Nominations for Bioconductor 2023 Awards!
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12 months ago • updated 11 months ago shepherl 3.8k
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News: Seeking members for BioC2023 organizing committee
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15 months ago Maria Doyle ▴ 70
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News: Reminder: BioC2023, Awards, TAB Deadline approaching - May 31st!
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11 months ago Maria Doyle ▴ 70
11 results • Page 1 of 1
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Comment: Math expression in shapeCustom legend in EnhancedVolcano by pl23 • 0
Thank you very much - that worked perfectly! Word of warning to those who try this: it screws up the other legends because of the markdown …
Answer: PCA plot suggestions by Michael Love 41k
For help with interpretation and design of analysis, I recommend working with a local statistician. Due to time restrictions, I can only…
Comment: DESeq2 Error in `.rowNamesDF<-`(x, value = value): Invalid 'row.names' length by ussarizona ▴ 10
Hi Michael, Yes, I could figure it out what does the error mean. In my matrix I had the first colum GeneID while in my condition I only h…
Answer: Deseq2. decontXcounts not integers. Useful alternative? by Michael Love 41k
Another option would be to put the per sample estimated contamination in the design. This is for example how RUV etc help remove spurious D…
Answer: ATACseq merge peaks by ATpoint ★ 4.0k
That depends on your analysis. Typically, for differential analysis (and convenience) you would produce a single set of peaks (e.g. by merg…
Votes
Answer: Math expression in shapeCustom legend in EnhancedVolcano
Comment: DESeq2 Error in `.rowNamesDF<-`(x, value = value): Invalid 'row.names' length
Comment: Deseq2. decontXcounts not integers. Useful alternative?
Comment: Opposite sign of LFC in count plots of DEGs (DESeq2)
biomaRt error: database disk image is malformed
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Scholar to James W. MacDonald 65k
Popular Question to shepherl 3.8k
Scholar to Michael Love 41k
Supporter to JKim • 0
Popular Question to Gordon Smyth 50k
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