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ChIPSeqData
•
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0
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110
views
ChIP peaks comparison
ChIPSeqData
genomes
ChIPSeq
15 days ago
user_bioinfo
• 0
0
votes
0
replies
238
views
hichip fragments extraction chip seq
ChIPSeqData
interact
GenomicRanges
HiC
3 months ago
user_bioinfo
• 0
0
votes
0
replies
278
views
need help with Diffbind multiple groups
DiffBind
ChIPSeqData
6 months ago
Dinesh
• 0
1
vote
1
reply
423
views
Fold change calculation in Diffbind vs. DESEQ2?
DiffBind
ChIPSeqData
DESeq2
updated 6 months ago by
Michael Love
42k • written 6 months ago by
marcusn
• 0
0
votes
1
reply
3.1k
views
bwa mem2 index genome - chipseq analysis
Genome
bwamem
ChIPSeqData
index
updated 21 months ago by
ATpoint
★ 4.5k • written 21 months ago by
Maka
• 0
0
votes
2
replies
1.0k
views
New to ChipSeq getting 0 peaks using dba()
ChipSeq
ChIPSeqData
chipseqDB
24 months ago
stacy.genovese
• 0
0
votes
3
replies
1.3k
views
CountOverlap
GeneExpression
ChIPSeqData
updated 2.2 years ago by
James W. MacDonald
67k • written 2.2 years ago by
michela
▴ 20
0
votes
2
replies
2.6k
views
DiffBind bUseSummarizeOverlaps error - the rownames and colnames of the supplied assay(s) must be NULL or identical to those of the SummarizedExper…
DiffBind
ChIPSeqData
updated 2.4 years ago by
millerh1
▴ 10 • written 3.0 years ago by
sfpacman
• 0
0
votes
0
replies
675
views
ChIPpeakAnno: No seqlevelsStyle compatible entry
ChIPSeqData
3.0 years ago
tom.dean
• 0
5
votes
3
replies
2.0k
views
importing BED with non-integer values
ChIPseeker
ChIPSeqData
updated 4.0 years ago by
James W. MacDonald
67k • written 4.0 years ago by
Morris
▴ 10
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Answer: Unlocking Potential: NURS FPX Strategies and Insights
by
efsane_kral2000
• 0
https://diendannhansu.com/threads/hayal-sohbet-odalari.667004/ https://forum.realdigital.org/u/serkan https://animefagos.com/miembros/ser…
Comment: Unlocking Potential: NURS FPX Strategies and Insights
by
efsane_kral2000
• 0
https://www.hayalsohbet.net https://www.yerlichat.com https://www.yerlichat.net https://www.mavisim.net https://www.hayalchat.com http…
Comment: Is it recommended to analyze different tissues together when using edgeR
by
Gordon Smyth
51k
Just plot the samples with plotMDS(). Alternatively you would use `voomLmFit()` with `sample.weights=TRUE` or `var.group=tissue`. In princ…
Comment: Handling Epic Array Data
by
Melisa Tecik
• 0
Thanks a lot for the help. You saved my day
Answer: Differene between the Wald and LRT test for time-series gene expression data
by
James W. MacDonald
67k
The advantage to using the LRT is that it's an omnibus test that tells you if there are changes at any time point. If you have lots of time…
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Answer: Using voom-transformed counts for unsupervised analyses (PCA, Random Forest, Ela
Answer: Allele frequencies for ALL alleles of one SNP ?
Answer: Is it recommended to analyze different tissues together when using edgeR
Answer: Is it recommended to analyze different tissues together when using edgeR
Answer: Using Affymetrix Custom Array
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