Bioconductor ChIPSeqData

Showing : ChIPSeqData • reset

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358

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ChIPSeqData genomes ChIPSeq

14 months ago user_bioinfo • 0

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588

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ChIPSeqData interact GenomicRanges HiC

17 months ago user_bioinfo • 0

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546

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DiffBind ChIPSeqData

20 months ago Dinesh • 0

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927

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DiffBind ChIPSeqData DESeq2

updated 20 months ago by Michael Love 43k • written 20 months ago by marcusn ▴ 10

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5.3k

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Genome bwamem ChIPSeqData index

updated 2.9 years ago by ATpoint ★ 5.0k • written 2.9 years ago by Maka • 0

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ChipSeq ChIPSeqData chipseqDB

3.1 years ago stacy.genovese • 0

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1.7k

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GeneExpression ChIPSeqData

updated 3.3 years ago by James W. MacDonald 68k • written 3.3 years ago by michela ▴ 20

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3.2k

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DiffBind ChIPSeqData

updated 3.6 years ago by millerh1 ▴ 10 • written 4.1 years ago by sfpacman • 0

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903

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ChIPSeqData

4.2 years ago tom.dean • 0

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2.9k

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ChIPseeker ChIPSeqData

updated 5.2 years ago by James W. MacDonald 68k • written 5.2 years ago by Morris ▴ 10

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Comment: Ensembl plants at annotationHub? by jwp48 • 0

Nope I don't mind haha! Anyway thanks so much! Thats super kind of you!

Answer: Combining two proteomics datasets with limpa by Gordon Smyth 53k

Hi Andrew, We don't have that much experience combining different datasets with limpa yet, but my feeling is that the same DPC should be u…

Comment: Guitar R package requires update due to dependency GenomicFeatures by ferran.llobet.cabau ▴ 10

Thank you @seandavi for your feedback. I followed your recommendations and generated a [pull request][1] including the fix for this issue…

Comment: Ensembl plants at annotationHub? by Guido Hooiveld ★ 4.1k

Hope you don't mind I am not Johannes... ;-) Note that you nowadays can generate these yourselves using the `docker` image Johannes made av…

Comment: How does contrasts.fit do in limma to extract comparisons with a model having in by jtsy6383 • 0

Thanks for the reminder about DiffVar (for that project I ended up using GAMLSS in the end and haven't touched DiffVar since) and the alter…

Votes

Answer: Where do the filename come from in the LOLA datasets?

Bioconductor Maintainer Application

A: What is logFC and "B" in methylation analysis ??

limma moderated t-statistics and B-statistics

Comment: Guitar R package requires update due to dependency GenomicFeatures

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Popular Question to Lluís Revilla Sancho ▴ 760