Bioconductor ChIPSeqData

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225

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ChIPSeqData genomes ChIPSeq

6 months ago user_bioinfo • 0

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371

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ChIPSeqData interact GenomicRanges HiC

9 months ago user_bioinfo • 0

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385

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DiffBind ChIPSeqData

12 months ago Dinesh • 0

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725

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DiffBind ChIPSeqData DESeq2

updated 12 months ago by Michael Love 43k • written 12 months ago by marcusn ▴ 10

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Genome bwamem ChIPSeqData index

updated 2.2 years ago by ATpoint ★ 4.8k • written 2.2 years ago by Maka • 0

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ChipSeq ChIPSeqData chipseqDB

2.5 years ago stacy.genovese • 0

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GeneExpression ChIPSeqData

updated 2.6 years ago by James W. MacDonald 68k • written 2.6 years ago by michela ▴ 20

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DiffBind ChIPSeqData

updated 2.9 years ago by millerh1 ▴ 10 • written 3.5 years ago by sfpacman • 0

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762

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ChIPSeqData

3.5 years ago tom.dean • 0

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2.6k

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ChIPseeker ChIPSeqData

updated 4.5 years ago by James W. MacDonald 68k • written 4.5 years ago by Morris ▴ 10

10 results • Page 1 of 1

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Comment: limma::voom vs edgeR::voomLmFit - when to use? by Geoff • 0

Just wondering--why was this function put into `edgeR` rather than `limma`? Maybe a bit technical, but it is a little confusing from an out…

Comment: cannot download atena annotation for human by Davide • 0

Hi Robert, I was able to solve the problem. Indeed, it stems from the co-occurrence of two different AnnotationHub available for hg38. …

Comment: Setting ylims in bam coverage plot and assigning compound sashimi numbers to ove by macdonaldfrench7286566 • 0

Regarding the ylim for the coverage [space waves][1], have you tried accessing the ylim slot of the CoverageTrack object after you've creat…

Comment: How to left_join a tidySummarizedExperiment with a GRanges object by seqnames an by Kateřina • 0

I unfortunately haven't. Non-tidy grammar is fine, but I have wanted to use tidy-only grammar. Thank you nonetheless!

Comment: GAlignments Cigar to GRanges by pineiroalejandro • 0

Wow, so easy! Thanks for your quick reply.

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Answer: GAlignments Cigar to GRanges

When running contrasts, does it use normalized read counts?

Importing Salmon counts with tximport with host and virus genomes

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Scholar to Hervé Pagès 16k