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ChIPSeqData
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1.9k
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bwa mem2 index genome - chipseq analysis
Genome
bwamem
ChIPSeqData
index
updated 14 months ago by
ATpoint
★ 4.0k • written 14 months ago by
Maka
• 0
0
votes
2
replies
764
views
New to ChipSeq getting 0 peaks using dba()
ChipSeq
ChIPSeqData
chipseqDB
17 months ago
stacy.genovese
• 0
0
votes
3
replies
978
views
CountOverlap
GeneExpression
ChIPSeqData
updated 19 months ago by
James W. MacDonald
65k • written 19 months ago by
michela
▴ 20
0
votes
2
replies
2.2k
views
DiffBind bUseSummarizeOverlaps error - the rownames and colnames of the supplied assay(s) must be NULL or identical to those of the SummarizedExper…
DiffBind
ChIPSeqData
updated 22 months ago by
millerh1
▴ 10 • written 2.4 years ago by
sfpacman
• 0
0
votes
0
replies
505
views
ChIPpeakAnno: No seqlevelsStyle compatible entry
ChIPSeqData
2.4 years ago
tom.dean
• 0
5
votes
3
replies
1.3k
views
importing BED with non-integer values
ChIPseeker
ChIPSeqData
updated 3.5 years ago by
James W. MacDonald
65k • written 3.5 years ago by
Morris
▴ 10
6 results • Page
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Comment: Opposite sign of LFC in count plots of DEGs (DESeq2)
by
winwater0928
• 0
Thank you for your comment! I'll review my code from top to bottom.
Comment: Math expression in shapeCustom legend in EnhancedVolcano
by
James W. MacDonald
65k
So basically you are using HTML markup to set your subscripts and whatnot, and then `element_markdown` does the rest.
Comment: Math expression in shapeCustom legend in EnhancedVolcano
by
James W. MacDonald
65k
Oh snap. Foiled again. Here it is with spaces & ge ; and & lt ;
Comment: Math expression in shapeCustom legend in EnhancedVolcano
by
James W. MacDonald
65k
Oh LOL. My markdown got edited by the markdown editor! What is between the p and 50 in the first case is the HTML for greater than or equal…
Comment: Math expression in shapeCustom legend in EnhancedVolcano
by
James W. MacDonald
65k
Ah, good point. You could instead try ``` > library(ggtext) > keyvals.shape = c(rep(3,10), rep(2,8)) > names(keyvals.shape) = ifelse(keyva…
Votes
Comment: Opposite sign of LFC in count plots of DEGs (DESeq2)
biomaRt error: database disk image is malformed
Comment: biomaRt : No lock file for BiocFileCache
Answer: Cross-species analysis - how to compute the mid parent value?
Answer: Batch/method effect correction on a cohort of patients with RUVseq and DESeq2
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