Showing : Cheminformatics • reset
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Comparing compounds in CheminneR
Cheminformatics ChemmineR ChemmineDrugs
8 months ago Sean • 0
0
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1
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815
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ChemmineOB expects libopenbabel.7.dylib but latest OpenBabel 2.4.1 contains libopenbabel.5.dylib
cheminf ChemmineOB Cheminformatics ChemmineR
2.7 years ago adelenelai • 0
1
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1
reply
898
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Where can I locate the bioassayR database?
bioassayr chemmineR cheminformatics
5.2 years ago • updated 5.1 years ago Anthony Nash ▴ 20
3
votes
1
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687
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Can limma/other DE algorithms be used for differential analysis of chemical descriptors?
limma edger deseq2 cheminformatics
updated 5.7 years ago by ★ 28k • written 5.7 years ago by • 0
2
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3
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1.1k
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cellHTS2 importa and analysing data from chemical compound screening
cellhts2 cheminformatics
updated 7.4 years ago by ▴ 160 • written 7.4 years ago by ▴ 810
1
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3
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1.9k
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Bioc 3.3 Windows 10 eiR package fails to install
software error R cheminformatics package installation eiR
updated 7.9 years ago by • 0 • written 7.9 years ago by • 0
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1.2k
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BioC 2013, July 17 (Developer Day) 18-19: 'Early' registration deadline July 1
Cheminformatics Visualization Cancer Ovarian DEXSeq minfi DESeq2 BaseSpaceR epivizr minfi
10.8 years ago Martin Morgan 25k
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1.3k
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'Cheminformatics in R' workshop at the EBI: 17-18 May 2010
Metabolomics Cheminformatics Visualization xcms Metabolomics Cheminformatics Visualization
14.2 years ago Gabriella Rustici ▴ 60
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874
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R/BioC workshops in Southern California
Cheminformatics Clustering Cheminformatics Clustering
15.8 years ago Thomas Girke ★ 1.7k
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0
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948
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R/BioC workshops in Southern California
Cheminformatics Clustering Cheminformatics Clustering
16.6 years ago Thomas Girke ★ 1.7k
10 results • Page 1 of 1
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Answer: Dominance Index for Shotgun Metagenomics Data by Leo Lahti ▴ 40
1. Note that Simpson's dominance index (\lambda) is a different index than inverse Simpson (1/\lambda) or reciprocal Simpson (1-\lambda). T…
Comment: Math expression in shapeCustom legend in EnhancedVolcano by pl23 • 0
Thank you very much - that worked perfectly! Word of warning to those who try this: it screws up the other legends because of the markdown …
Answer: PCA plot suggestions by Michael Love 41k
For help with interpretation and design of analysis, I recommend working with a local statistician. Due to time restrictions, I can only…
Comment: DESeq2 Error in `.rowNamesDF<-`(x, value = value): Invalid 'row.names' length by ussarizona ▴ 10
Hi Michael, Yes, I could figure it out what does the error mean. In my matrix I had the first colum GeneID while in my condition I only h…
Answer: Deseq2. decontXcounts not integers. Useful alternative? by Michael Love 41k
Another option would be to put the per sample estimated contamination in the design. This is for example how RUV etc help remove spurious D…
Votes
Answer: Dominance Index for Shotgun Metagenomics Data
Answer: Math expression in shapeCustom legend in EnhancedVolcano
Comment: DESeq2 Error in `.rowNamesDF<-`(x, value = value): Invalid 'row.names' length
Comment: Deseq2. decontXcounts not integers. Useful alternative?
Comment: Opposite sign of LFC in count plots of DEGs (DESeq2)
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