Bioconductor DNAstringset

Showing : DNAstringset • reset

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dnastringset dnastringsetlist seqnames

7.1 years ago s.ghignone ▴ 10

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dnastringset list stringset

updated 8.4 years ago by Martin Morgan 25k • written 8.4 years ago by vinod.acear ▴ 50

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subseq Xvector dnastringset

updated 8.5 years ago by Hervé Pagès 16k • written 8.5 years ago by Sophie • 0

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dnastringset aastringset

8.7 years ago XIA.PAN ▴ 20

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DNAstringset

updated 8.8 years ago by Hervé Pagès 16k • written 8.8 years ago by XIA.PAN ▴ 20

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dnastringset getseq

updated 9.4 years ago by Hervé Pagès 16k • written 9.4 years ago by TimothéeFlutre ▴ 80

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pwmenrich dnastringset

updated 9.7 years ago by Robert Stojnic ▴ 50 • written 9.7 years ago by sekawaiwai2006 ▴ 20

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dnastringset parallel iterators

10.0 years ago ben.ward ▴ 30

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DNAStringSet sample

updated 10.0 years ago by Hervé Pagès 16k • written 10.0 years ago by vinod.acear ▴ 50

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dnastringset

updated 10.0 years ago by Martin Morgan 25k • written 10.0 years ago by komal.rathi ▴ 120

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vcf testthat dnastringset

10.1 years ago TimothéeFlutre ▴ 80

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readVcf DNAStringSet DNAStringSetList variantannotation readvcf

10.6 years ago dan.gatti • 0

12 results • Page 1 of 1

Recent ...

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Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication? by Ahmed Salah • 0

Thank you very much! will take that into consideration

Comment: Large logFC but somewhat high FDR by JKim • 0

Thank you very much for taking the time to answer the question. I really appreciate your insights and comments.

Comment: upstream git branches of bioc-release by Jeroen ▴ 10

OK I have updated https://bioc-release.r-universe.dev accordingly. Let me know if you find version differences when mirroring binaries.

Comment: Large logFC but somewhat high FDR by Gordon Smyth 53k

I don't know what `tp1` is. The relevant histogram would be: ``` hist(fit2$p.value[,"KO_vs_WT"]) ```

Answer: p.adjust BH Question by Gordon Smyth 53k

Duplicate of https://support.bioconductor.org/p/41077/

Votes

Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication?

Answer: Large logFC but somewhat high FDR

Comment: upstream git branches of bioc-release

Awards • All

Scholar to Gordon Smyth 53k