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•
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0
votes
4
replies
420
views
how to extract list in quantile in R
R
quantile
list
6 months ago
sat
• 0
0
votes
0
replies
1.2k
views
stuck on unimplemented type 'list' in 'EncodeElement'
list
save
dataframe
updated 15 months ago by
shepherl
3.5k • written 15 months ago by
orticello.1160797
• 0
0
votes
4
replies
1.2k
views
how to reformat complex list object (derived with TCGAbiolinks)?
TCGA
tcgabiolinks
list
reformat
5.7 years ago
Guido Hooiveld
★ 3.7k
3
votes
4
replies
3.3k
views
How to convert a DnaStringSet object to list of seq?
dnastringset
list
stringset
updated 6.2 years ago by
Martin Morgan
25k • written 6.2 years ago by
vinod.acear
▴ 50
1
vote
12
replies
1.8k
views
How can I integrate set of compressedList in multiple list into one without duplication?
r
iranges
findoverlaps
IntegerList
List
7.1 years ago • updated 6.9 years ago
jian_liangli
• 0
3
votes
5
replies
1.4k
views
How can I coerce "list" to S4 "List" (reproducible example is available)?
coercion
data manipulation
s4vectors
List
7.2 years ago
Jurat Shahidin
▴ 80
2
votes
3
replies
4.0k
views
Deseq2. Cluster of an specific list
deseq2
heatmap
clustering
file
list
updated 8.0 years ago by
Michael Love
40k • written 8.0 years ago by
chariko
• 0
4
votes
2
replies
3.0k
views
select keys from org.Mm.eg.db
org.mm.eg.db
select
list
updated 8.0 years ago by
James W. MacDonald
63k • written 8.0 years ago by
Assa Yeroslaviz
★ 1.5k
0
votes
1
reply
832
views
preferred mirrors list - permanently
mirror
preferred
list
updated 8.3 years ago by
Dan Tenenbaum
★ 8.2k • written 8.3 years ago by
lejeczek
▴ 10
0
votes
1
reply
996
views
Mixing list from Piano package output
Piano
List
updated 8.4 years ago by
Leif Väremo
▴ 70 • written 8.4 years ago by
nonCodingGene
▴ 10
2
votes
4
replies
1.6k
views
summing integer RLE
rle
list
irange
grangeslist
updated 8.5 years ago by
Chris Seidel
▴ 80 • written 8.5 years ago by
gen
▴ 30
11 results • Page
1 of 1
Recent ...
Replies
Comment: DMRcate design
by
James W. MacDonald
63k
That's what identical context means.
Comment: DMRcate design
by
Jitendra
▴ 10
Thanks James, but I did not understand it clearly. Could I used same Limma design matrix for DMRcate?
Comment: Steps needed to change design (relevel factors) in DESeq2
by
jd774
• 0
Thanks for the example code, would the `"condition_1_vs_2"` and `"condition_2_vs_1"` giving same or different results on DEGs and normalize…
Answer: heatmap.2 - change column & row locations; angle / rotate
by
nehagoyal6397
• 0
Window 10 are comes with the new updates [how to fix connections to wireless displays in windows 10](http://fixwindows10connections.com) ju…
Comment: filtering out lowly expressed genes by groups
by
James W. MacDonald
63k
You might want to filter first though. ``` fun <- function(deseqobj, contvec, cutoff) { lildds <- dds[rowMeans(assays(deseqobj…
Votes
Bioconductor 3.18 db0s, OrgDbs, and TxDbs now available
Comment: Timely differentially expressed genes
Comment: NPARC package y-variable
Comment: List of Deprecated Packages for Bioc3.18
Answer: Manual creation of qPCRset does not work
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