Showing : Database • reset
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Database/tool that is able to tell me if the glutathionylation of a protein inhibits it?
protein database glutathionylation PTM
4.2 years ago Camelia • 0
1
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7
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4.1k
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How can I convert the "Majority protein IDs" to "Gene names" (example below shown)?
MassSpectrometryData Proteome Database DEP
4.5 years ago tpm • 0
1
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1
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707
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can i get the database of bioconductor?
database
6.0 years ago jsdh120707 • 0
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1.5k
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Job: Computational Biology/Bioinformatics Post-doctoral position, Johns Hopkins University, Baltimore, USA
rnaseq next-generation sequencing database Job
7.8 years ago cleo.k.yang • 0
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3
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1.8k
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error while making database using Annotationforge package
annotationforge error database
updated 9.2 years ago by ★ 4.1k • written 9.2 years ago by ▴ 10
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setting database.path for extracting PSSM Feature in BioSeqClass
bioseqclass pssm database featurepssm feature
10.0 years ago greensandag • 0
2
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1
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1.5k
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Update database names in the biomaRT package
biomaRT database
updated 10.6 years ago by ★ 1.3k • written 10.6 years ago by ▴ 20
7 results • Page 1 of 1
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Comment: 3-factor DESeq2 trime-series analysis by gogeni5529 • 0
Thans you @swbarnes2 for the answer. I can see why trying to include all three parameters might be difficult to interpret. But we're inte…
Comment: 3-factor DESeq2 trime-series analysis by swbarnes2 ★ 1.4k
What does your PCA look like? A lot of times, I find that different cell lines are so different from each other, that they should not be d…
Answer: Can I set the normalizationFactors of DEseq2 object as 1 after using RUVg? by yongjie.wang • 0
Thanks for your reply. " normFactors <- exp(-1 * offst(set2)) normFactors <- normFactors / exp(rowMeans(log(normFactors))) normalizat…
Answer: Can I set the normalizationFactors of DEseq2 object as 1 after using RUVg? by Michael Love 43k
I'm not familiar with this usage, or code here ``` normFactors <- exp(-1 * offst(set2)) ``` In the RNA-seq gene-level workflow, we …
Answer: Which of apeglm and ashr may be more appropriate for pseudobulked DESeq2 analysi by Michael Love 43k
> apeglm appears much more aggressive in shrinkage, pushing many genes toward logFC = 0 > ashr maintains a gradient of shrinkage val…
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Answer: Limpa Pipeline Order
A: How barcode-plot enrichment is calculated?
A: How barcode-plot enrichment is calculated?
Answer: ROAST compare results with complex design
How to account for solvent controls in DESeq2 when comparing follicular vs luteal phase?
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