Showing : FeatureCounts • reset
0
votes
2
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267
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Odd behavior of Rsubread::featureCounts when setting `nonOverlap = 0`
featureCounts Rsubread
6 weeks ago • updated 23 days ago isaac.vock • 0
0
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0
replies
152
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Feature Counts -R XS Read Assignment Tag
FeatureCounts Rsubread
9 weeks ago chris2.a.white • 0
1
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1
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277
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featureCounts unable to assign long reads to one specific isoform
featureCounts Rsubread
updated 9 weeks ago by ★ 3.6k • written 3 months ago by • 0
0
votes
4
replies
460
views
Adjusting featureCounts settings in Galaxy for miRNA overlaps
featureCounts Rsubread
updated 3 months ago by 50k • written 3 months ago by • 0
4
votes
6
replies
765
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[BUG] Rsubread::featureCounts quirk in CORE files: different target list ordering for same target lists
featurecounts Rsubread
3 months ago isaac.vock • 0
0
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0
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969
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Tutorial: Read data file containing both counts and annotation into edgeR
rpkm edgeR featureCounts
8 months ago Gordon Smyth 50k
0
votes
2
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1.0k
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understanding differences in RSEM, STAR outputs and featureCounts
RNASeqData Rsubread mapping featurecounts
updated 9 months ago by 65k • written 9 months ago by • 0
1
vote
1
reply
676
views
featureCounts bug with unpaired reads
Rsubread featureCounts
updated 9 months ago by ▴ 380 • written 9 months ago by • 0
1
vote
5
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4.7k
views
featureCounts (subread v2.0.2) ERROR: invalid parameter: '−−countReadPairs'
subread featureCounts
updated 9 months ago by ▴ 380 • written 2.9 years ago by ▴ 10
0
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2
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3.5k
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Dealing with multi-overlapping and multi-mapping reads
RNA-seq featureCounts ht-seq
written 3.8 years ago by ▴ 80
0
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5
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2.3k
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FeatureCounts output to SAM like htseq-counts?
featurecounts SAM htseqcounts
updated 10 months ago by ▴ 380 • written 7.0 years ago by • 0
2
votes
2
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1.6k
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Running featureCounts() in 'IntersectionStrict' mode
rsubread featurecounts summarizeoverlaps
updated 6 weeks ago by • 0 • written 7.9 years ago by ▴ 90
3
votes
16
replies
18k
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featureCounts - paired-end data
featurecounts rsubread
updated 10 months ago by • 0 • written 9.0 years ago by ▴ 140
7
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28
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6.2k
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Rsubread::featureCounts extremely slow on some annotations
rsubread featurecounts
updated 3 months ago by 50k • written 9.2 years ago by ★ 7.9k
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