25 days ago • updated 6 days ago
isaac.vock
•
0
0
votes
2
replies
238
views
0
votes
0
replies
133
views
7 weeks ago
chris2.a.white
•
0
1
vote
1
reply
247
views
7
votes
28
replies
6.1k
views
updated 11 weeks ago by
Gordon Smyth
50k
•
written 9.1 years ago by
Ryan C. Thompson
★
7.9k
0
votes
4
replies
418
views
updated 12 weeks ago by
Gordon Smyth
50k
•
written 12 weeks ago by
tjgray4
•
0
4
votes
6
replies
736
views
3 months ago • updated 12 weeks ago
isaac.vock
•
0
0
votes
2
replies
3.5k
views
written 3.8 years ago by
ag1805x
▴
80
0
votes
0
replies
927
views
8 months ago • updated 7 months ago
Gordon Smyth
50k
0
votes
2
replies
1.0k
views
updated 8 months ago by
James W. MacDonald
65k
•
written 8 months ago by
vitoriastavis
•
0
1
vote
1
reply
651
views
updated 9 months ago by
Yang Liao
▴
380
•
written 9 months ago by
StevenE.Strong
•
0
0
votes
1
reply
854
views
0
votes
0
replies
417
views
2
votes
9
replies
1.6k
views
13 months ago
Hilary
▴
30
0
votes
2
replies
850
views
updated 14 months ago by
Wei Shi
★
3.6k
•
written 17 months ago by
Konstantin
•
0
0
votes
0
replies
615
views
0
votes
1
reply
769
views
0
votes
1
reply
546
views
3
votes
3
replies
2.7k
views
updated 15 months ago by
Gordon Smyth
50k
•
written 15 months ago by
Sara
•
0
0
votes
1
reply
1.9k
views
1
vote
1
reply
1.9k
views
updated 17 months ago by
Gordon Smyth
50k
•
written 17 months ago by
Sara
•
0
0
votes
0
replies
573
views
2
votes
3
replies
1.3k
views
updated 17 months ago by
Gordon Smyth
50k
•
written 17 months ago by
Jon
•
0
2
votes
2
replies
762
views
18 months ago
dario.beraldi
•
0
0
votes
0
replies
524
views
18 months ago
rridley3
•
0
0
votes
2
replies
1.4k
views
0
votes
1
reply
3.2k
views
updated 21 months ago by
Gordon Smyth
50k
•
written 21 months ago by
selmanurkeskin
•
0
0
votes
1
reply
727
views
0
votes
1
reply
827
views
1
vote
1
reply
1.4k
views
updated 23 months ago by
Gordon Smyth
50k
•
written 23 months ago by
margo
•
0
2
votes
1
reply
1.5k
views
0
votes
4
replies
1.7k
views
23 months ago
KMS
▴
20
1
vote
4
replies
1.4k
views
24 months ago
Chise
▴
10
3
votes
11
replies
3.5k
views
2.0 years ago • updated 24 months ago
Sarah_piggy
▴
10
1
vote
4
replies
1.6k
views
2.0 years ago
Lucy
▴
60
1
vote
5
replies
1.9k
views
2
votes
2
replies
5.8k
views
2.3 years ago
Chise
▴
10
4
votes
4
replies
4.9k
views
2.5 years ago
k___
▴
30
0
votes
2
replies
1.4k
views
1
vote
1
reply
1.2k
views
updated 2.7 years ago by
Wei Shi
★
3.6k
•
written 2.7 years ago by
dario.beraldi
•
0
1
vote
5
replies
4.7k
views
4
votes
5
replies
2.1k
views
2
votes
2
replies
1.8k
views
0
votes
0
replies
767
views
1
vote
2
replies
3.5k
views
2
votes
3
replies
1.9k
views
updated 4.4 years ago by
James W. MacDonald
65k
•
written 4.4 years ago by
adeler001
•
0
4
votes
2
replies
1.2k
views
0
votes
2
replies
1.0k
views
updated 4.7 years ago by
Wei Shi
★
3.6k
•
written 4.7 years ago by
hafiz.talhamalik
•
0
4
votes
3
replies
4.3k
views
updated 4.8 years ago by
Wei Shi
★
3.6k
•
written 4.8 years ago by
hauken_heyken
▴
80
1
vote
2
replies
2.7k
views
updated 4.8 years ago by
Gordon Smyth
50k
•
written 4.8 years ago by
algenubi81
•
0
1
vote
1
reply
878
views
updated 5.0 years ago by
Gordon Smyth
50k
•
written 5.0 years ago by
wunderl
▴
40
Recent ...
Replies
Answer: Deseq2. decontXcounts not integers. Useful alternative?
by
Michael Love
41k
Another option would be to put the per sample estimated contamination in the design. This is for example how RUV etc help remove spurious D…
Answer: ATACseq merge peaks
by
ATpoint
★
4.0k
That depends on your analysis. Typically, for differential analysis (and convenience) you would produce a single set of peaks (e.g. by merg…
Comment: Deseq2. decontXcounts not integers. Useful alternative?
by
camp
▴
10
Yes, @atpoint is correct. decontX decontaminated counts are not integers due to the way the variation inference algorithm works, but you ca…
Comment: Deseq2. decontXcounts not integers. Useful alternative?
by
ATpoint
★
4.0k
I do not know this decontamination tool you use but generally:
If these counts are basically "corrected" raw counts in the sense that they'…
Answer: Improving the design matrices vignette in RNAseq123
by
Gordon Smyth
50k
Thanks to Shian Su, we have confirmed that the problem in the design matrices vignette html is caused by a bug in knitr 1.44 (to do with sp…
Votes
Awards
• All
Locations
• All
Germany, 5 minutes ago
United States, 15 minutes ago
United States, 20 minutes ago
France, 25 minutes ago
United States, 26 minutes ago
Germany, 5 minutes ago
United States, 15 minutes ago
United States, 20 minutes ago
France, 25 minutes ago
United States, 26 minutes ago
Traffic: 1064 users visited in the last hour
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by the
version 2.3.6
version 2.3.6