Bioconductor FeatureCounts

Showing : FeatureCounts • reset

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268

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featureCounts Rsubread

6 weeks ago • updated 24 days ago isaac.vock • 0

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152

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FeatureCounts Rsubread

10 weeks ago chris2.a.white • 0

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279

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featureCounts Rsubread

updated 10 weeks ago by Wei Shi ★ 3.6k • written 3 months ago by Alex • 0

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6.2k

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rsubread featurecounts

updated 3 months ago by Gordon Smyth 50k • written 9.2 years ago by Ryan C. Thompson ★ 7.9k

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460

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featureCounts Rsubread

updated 3 months ago by Gordon Smyth 50k • written 3 months ago by tjgray4 • 0

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766

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featurecounts Rsubread

3 months ago isaac.vock • 0

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3.5k

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RNA-seq featureCounts ht-seq

written 3.8 years ago by ag1805x ▴ 80

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971

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rpkm edgeR featureCounts

8 months ago Gordon Smyth 50k

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1.0k

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RNASeqData Rsubread mapping featurecounts

updated 9 months ago by James W. MacDonald 65k • written 9 months ago by vitoriastavis • 0

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676

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Rsubread featureCounts

updated 9 months ago by Yang Liao ▴ 380 • written 9 months ago by StevenE.Strong • 0

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4.7k

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subread featureCounts

updated 9 months ago by Yang Liao ▴ 380 • written 2.9 years ago by s.muroy ▴ 10

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2.3k

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featurecounts SAM htseqcounts

updated 10 months ago by Yang Liao ▴ 380 • written 7.0 years ago by courtney.stairs • 0

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1.6k

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rsubread featurecounts summarizeoverlaps

updated 6 weeks ago by isaac.vock • 0 • written 7.9 years ago by Jon Manning ▴ 90

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18k

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featurecounts rsubread

updated 10 months ago by Robert • 0 • written 9.0 years ago by samuel collombet ▴ 140

14 results • Page 1 of 1

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Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package) by Poonam • 0

Thank you, Michael. I used the script shared by you. The genomic distribution of the original and null loci looks like non-stationary. Plea…

Comment: ChAMP installation issue by shepherl 3.9k

Without showing the commands you tried and the full output including error it is impossible to help. Please provide additional information…

Answer: Gene set enrichment analysis by Guido Hooiveld ★ 3.9k

No, that is not possible. The idea of gene set enrichment analysis (GSEA) is that it checks which gene sets (pathways, GO categories) are e…

Comment: error in limma , contrast.matrix Number of rows of contrast matrix must match nu by zzrammal • 0

thank you for your response. The problem is resolved. When i did a fit for the linear model i put NULL for the design fit <- lmFit(count_…

Comment: More regions in union when increasing DBA$config$mergeOverlap by Ziliang • 0

I am so confused and frustrated learning to use this software. Isn't how you merge the peaksets one of the most important steps for the com…

Votes

A: DEXSeq time course design

using variable in design formula

differential expression for Single-cell RNAseq data using edgeR

Why p value inconsistent when using different number of pathway score?

Answer: error in limma , contrast.matrix Number of rows of contrast matrix must match nu

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