Biostar FlowSet

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flowcore flowset bioconductor flow cytometry fcs file

5.0 years ago • updated 4.9 years ago Samuel Ahuno • 0

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flow cytometry flowSet UMAP .fcs files

updated 3.5 years ago by mikhael.manurung ▴ 270 • written 3.5 years ago by s.lucasblack • 0

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1.3k

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flowcore opencyto gating flowset

updated 6.0 years ago by Jiang, Mike ★ 1.3k • written 6.0 years ago by jordan.xanthopoulos • 0

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604

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flowcytometry flowSOM flowSET flowFrame

3.8 years ago fabrizio.benedetti.82 • 0

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FlowSet data visualization cellcounts

5.6 years ago Maria • 0

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Comment: pathview says my nonmodel species is unknown: "species invalid" by Guido Hooiveld ★ 3.5k

Does a restart of R help? Does a reinstall of the library `png` help? In a fresh R-session, what is the output from `BiocManager::valid()…

Comment: Don't let TopGo to trimm long GO names by James W. MacDonald 62k

Did you not notice that this has been answered *as part of this thread that you posted in?*

Comment: pathview says my nonmodel species is unknown: "species invalid" by nute11a • 0

Hi Luo, thank you so much for your helpful comment. While I was able to get this to work and visualize my interesting KEGG pathways (yay!) …

Comment: Error in `$<-.data.frame`(`*tmp*`, "dispersion", value = NA) by Wolfgang Huber 13k

Hi Ben, your first step should be to upgrade to the current versions of R and Bioconductor. There is really little point in trouble-shooti…

Answer: Is ther an annotation package for sheep (Ovis aries) by Guido Hooiveld ★ 3.5k

Yes, there is! An `EnsDb` for sheep can be obtained through the so-called `AnnotationHub`. See James' and my posts in the thread linked t…

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FDR and padj in deseq and edger

Comment: Mutect version, matched normal and manual curation in PureCN

Answer: Is ther an annotation package for sheep (Ovis aries)

Is ther an annotation package for sheep (Ovis aries)

Awards • All

Scholar to James W. MacDonald 62k

Commentator to Michael Love 39k