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FourCSeq
•
reset
1
vote
10
replies
2.2k
views
FourC object from scratch
hi-c
HiTC
fourcseq
8.6 years ago • updated 8.4 years ago
Nicolas Servant
▴ 260
2
votes
4
replies
2.2k
views
FourCSeq - how many bases to trim with countFragmentOverlaps
fourcseq
updated 8.0 years ago by
felix.klein
▴ 150 • written 8.6 years ago by
francesc.lopez
• 0
4
votes
27
replies
3.8k
views
FourCseq - error countFragmentOverlaps()
FourCseq
fourcseq
updated 8.9 years ago by
ericaenjoy3
• 0 • written 8.9 years ago by
Theo
▴ 10
0
votes
7
replies
2.1k
views
FourCseq -problem with countFragmentOverlaps
FourCseq
updated 8.8 years ago by
Hervé Pagès
16k • written 8.8 years ago by
dzis
• 0
0
votes
7
replies
2.5k
views
fourCseq - error getZscores
fourcseq
updated 8.3 years ago by
felix.klein
▴ 150 • written 8.5 years ago by
samuel collombet
▴ 140
0
votes
3
replies
1.1k
views
[FourCSeq] plotDifferences and plotZscores
fourcseq
7.9 years ago
fidlay
• 0
3
votes
8
replies
1.7k
views
FourCSeq - how to write tables with the results
fourcseq
updated 5.5 years ago by
ferbecneu
• 0 • written 8.6 years ago by
francesc.lopez
• 0
2
votes
4
replies
1.4k
views
fourCseq - zscore distribution - trans interractions
fourCseq
updated 9.0 years ago by
Martin Morgan
25k • written 9.5 years ago by
samuel collombet
▴ 140
0
votes
4
replies
1.2k
views
fourCseq - getDifferences and normnalisation
fourcseq
updated 9.5 years ago by
felix.klein
▴ 150 • written 9.5 years ago by
samuel collombet
▴ 140
1
vote
8
replies
1.6k
views
FourCseq: getZScores errors, first case 6 digenerated cutterm second case 4 base cutter
fourcseq
7.8 years ago
Theo
▴ 10
0
votes
3
replies
1.3k
views
Error in "getZScores()" while running FourCSeq package
fourcseq
8.2 years ago
MaddieS
• 0
0
votes
2
replies
944
views
FourCSeq - errors in plotZScores
fourcseq
updated 6.8 years ago by
Wolfgang Huber
★ 13k • written 6.8 years ago by
rustavo
• 0
0
votes
2
replies
881
views
plotZScores error in FourCSeq
fourCseq
8.0 years ago
snowhune
• 0
0
votes
11
replies
1.9k
views
FourCseq - error ountFragmentOverlaps()
fourcseq
9.2 years ago
samuel collombet
▴ 140
0
votes
2
replies
898
views
FourCseq: mixed amount of replication/samples
fourcseq
7.8 years ago
Theo
▴ 10
0
votes
2
replies
1.1k
views
FourCSeq problem with getZScores
FourCSeq
updated 8.7 years ago by
felix.klein
▴ 150 • written 8.7 years ago by
a.chesi
• 0
0
votes
1
reply
1.1k
views
FourCSeq - getZScores & getDifferences function
fourcseq
updated 8.8 years ago by
felix.klein
▴ 150 • written 8.8 years ago by
mqbsszsy
• 0
0
votes
1
reply
884
views
FourCSeq - Significant changes between condition without replicate
fourcseq
updated 8.8 years ago by
Wolfgang Huber
★ 13k • written 8.8 years ago by
julienpontis
• 0
0
votes
1
reply
1.0k
views
FourCSeq problem with getZScores and multiple viewpoints
FourCSeq
getZScores
viewpoints
software error
8.4 years ago
dzis
• 0
0
votes
3
replies
1.1k
views
FourCSeq what is inverse-vst
fourcseq
updated 8.3 years ago by
felix.klein
▴ 150 • written 8.4 years ago by
sinhashruti
• 0
2
votes
2
replies
1.0k
views
FourCSeq- paired-end library ?
fourcseq
updated 8.0 years ago by
felix.klein
▴ 150 • written 8.0 years ago by
snowhune
• 0
0
votes
2
replies
929
views
FourCSeq- without replicates
fourcseq
updated 7.9 years ago by
felix.klein
▴ 150 • written 7.9 years ago by
tlgolan
• 0
0
votes
1
reply
857
views
FourCSeq - Significant Interaction
fourcseq
updated 8.8 years ago by
Wolfgang Huber
★ 13k • written 8.8 years ago by
julienpontis
• 0
0
votes
5
replies
1.1k
views
local fit and FourCseq
local fit
fourcseq
updated 7.8 years ago by
felix.klein
▴ 150 • written 7.8 years ago by
tlgolan
• 0
1
vote
1
reply
903
views
FourCseq- adding information manually
fourcseq
updated 7.8 years ago by
felix.klein
▴ 150 • written 7.8 years ago by
tlgolan
• 0
0
votes
1
reply
794
views
FourCSeq - data(fc) ?
FourCSeq
updated 8.8 years ago by
Wolfgang Huber
★ 13k • written 8.8 years ago by
julienpontis
• 0
0
votes
2
replies
1.0k
views
FourCseq, rawRanges Description
fourcseq
updated 7.8 years ago by
felix.klein
▴ 150 • written 7.8 years ago by
Theo
▴ 10
1
vote
1
reply
712
views
FourCSeq Pipeline for Capture-C Data
fourcseq
updated 5.9 years ago by
felix.klein
▴ 150 • written 5.9 years ago by
mmackiewicz
• 0
0
votes
0
replies
778
views
FourCseq and local fit
fourcseq
7.8 years ago
tlgolan
• 0
0
votes
0
replies
1.2k
views
FourC object from scratch
hic-c
hitc
fourcseq
8.6 years ago
Nicolas Servant
▴ 260
0
votes
0
replies
713
views
FourCSeq: Error in getZScores
fourcseq
getzscores
6.1 years ago
Gustavo Ruiz
• 0
0
votes
0
replies
537
views
FourCseq extraction of fragments
fourcseq
5.5 years ago
ferbecneu
• 0
32 results • Page
1 of 1
Recent ...
Replies
Comment: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
by
Hervé Pagès
16k
Indeed. Calculations involving floating point arithmetic are architecture-dependent, and testing the results should be done with `all.equal…
Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package)
by
Poonam
• 0
I will follow what you suggested. I didn't use max gap anywhere. I was following statistic I and regarding the size of features, my small…
Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package)
by
Michael Love
42k
Oh I see, for the second question, I don't have a great answer. I typically think of one set as the anchor, whose ascertainment is driving …
Comment: Help with running egsea()
by
James W. MacDonald
65k
Oh, right. Ideally you would use NCBI (aka Entrez gene) IDs because they are way more likely to be unique. Gene symbols are broken down int…
Comment: Help with running egsea()
by
Chris
• 0
Thanks James! I update the question. The last question mean when we use `buildIdx()`, could we use gene symbol instead of entrezID. However…
Votes
Answer: How to save the DEXSeq results
Answer: minfi support of illumina Infinium methylationEPIC v2.0
Comment: minfi support of illumina Infinium methylationEPIC v2.0
Answer: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
Comment: Help with running egsea()
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