Bioconductor GOTHiC

Showing : GOTHiC • reset

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GOTHiC BubbleTree PANR

6 weeks ago Abu 0

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2.0k

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diffhic gothic hicup hic-c hic

updated 6.3 years ago by Aaron Lun ★ 28k • written 6.3 years ago by mictadlo ▴ 10

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1.1k

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hic diffhic gothic hicup hic-c

6.3 years ago mictadlo ▴ 10

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1.3k

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GOTHiC

6.4 years ago alongalor ▴ 10

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959

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gothic

8.8 years ago manduchi ▴ 10

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1.9k

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GOTHiC hic

9.5 years ago Nathan Sheffield ▴ 10

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3.1k

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HiTC gothic diffhic HiC

9.6 years ago • updated 9.5 years ago Bogdan ▴ 670

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4.0k

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bioconductor gothic R

updated 9.8 years ago by Vicky_Tche • 0 • written 9.8 years ago by sv380 • 0

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1.3k

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GOTHiC software error

9.9 years ago bef22 • 0

9 results • Page 1 of 1

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Comment: Annotation package for Manduca sexta by GA ▴ 10

Thank you!

Comment: Improving performance of edgeR and limma while adjusting for multiple confounder by ATpoint ★ 4.8k

If 2 minutes is inacceptable to you then you can still fall back to limma-trend which should give a dramatic speedup and finish in seconds.…

Comment: getBM from biomaRt inconsistencies found with .gtf files across multiple species by Mike Smith ★ 6.6k

Great, thanks for the update from Ensembl. So the most relevant part of 'Location: Scaffold HG1277_PATCH: 137,021-141,806 forward strand' …

Answer: Improving performance of edgeR and limma while adjusting for multiple confounder by Gordon Smyth 52k

We recommend that you use voomLmFit() instead of voom+lmFit. We are pretty proud of the speed of glmQLFit and voom, and we hadn't expected…

Answer: Merging EPICV1 and V2 betas by James W. MacDonald 68k

It appears that [SeSAMe][1] has functions meant to do that sort of thing. [1]: https://bioconductor.org/packages/release/bioc/vignet…

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Looking for equivalent EPIC chip v1 vs. v2 annotation variables

Properly constructing a hypergeometric test

A: Is logFC a log2 fold change or some other base in scran::findMarkers

Comment: Error in retrieving clinical data

What is the cheapest day to fly on American Airlines? {Ask_Expert}

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