Bioconductor GTEx

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DESeq2 recount GTEx TCGA recount3

updated 2.7 years ago by ATpoint ★ 5.0k • written 2.7 years ago by David ▴ 20

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3.7k

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recount3 TCGA GTEx DESeq2

3.6 years ago David ▴ 20

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2.2k

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DESeq2 GTEx

4.9 years ago Bine ▴ 50

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4.3k

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recount gtex

updated 7.3 years ago by Leonardo Collado Torres ★ 1.1k • written 7.3 years ago by abe • 0

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1.6k

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limma voom gtex

7.8 years ago mico • 0

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2.4k

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rnaseq deseq2 gtex

updated 8.2 years ago by Michael Love 43k • written 8.2 years ago by vikram • 0

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5.0k

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public data TCGA GTEx Tutorial

8.5 years ago shepherl 4.3k

7 results • Page 1 of 1

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Comment: Open Positions for Doctoral Researchers in Molecular Medicine by TikTs33ssalpc • 0

This rotation style program sounds like a great way to explore different fields before committing to one. Similarly, apkgamex lets users ex…

Comment: Bioconductor Maintainer Application by TikTs33ssalpc • 0

This compliance focused approach makes a lot of sense. Clear reminders and opt in policies help maintain trust, similar to how users look f…

Comment: Bile acid analysis with limpa by ATpoint ★ 5.0k

Wilcox/Mann-Whitney-U cannot work because it is bound to sample size even when all of group X are lower than all of group Y. At 4 vs 3 the …

Comment: chemmineOB install help by Jeremy • 0

I could install ChemmineOB on my MacBook Pro M1 Max using this procedure **1. Install open-babel and eigen using homebrew and create a cus…

Comment: Making a Full Rank Model for Allele-Specific Expression with DESeq2 by Gordon Smyth 53k

The design matrix that I described above is completely general. I imagine that it would be possible to use the same approach to generate fu…

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A: DESeq2: Is it possible to convert read counts to expression values via TPM and r

A: Filtering read counts matrix: how to deal with duplicated gene symbols, differen

Comment: limpa analysis advice

Answer: When to use edgeR or limma

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