Showing : GenVisR • reset
3
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error in package GenVisR while installing
GenVisR GenVis
updated 6 months ago by ▴ 30 • written 22 months ago by • 0
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GenVisR - adding on genomic positions to CovGen graph
GenVisR GenCov
19 months ago Amy_ • 0
0
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1
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1.1k
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Unable to install GenVisR under most recent R / Bioconductor version; waterfall option mainDropMut is not working
Install mainDropMut GenVisR
updated 23 months ago by 16k • written 23 months ago by • 0
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1.6k
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How to generate a waterfall plot of mutations and CNAs that don't overlap
GenVisR maftools
23 months ago e • 0
0
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1
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1.0k
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Waterfall failing with custom file: Error in `colnames<-`(`*tmp*`, value = c("sample", "gene", "trv_type")) : attempt to set 'colnames' on an obje…
variants waterfall GenVisR
updated 3.5 years ago by ▴ 30 • written 3.5 years ago by ▴ 10
0
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1
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706
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Adding layer to legend in waterfall plot
GenVisR ggplot2 waterfall
4.6 years ago sheneicechang • 0
0
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0
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917
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Output GenVisR mutation frequency data by gene name instead of by sample name
GenVisR mutation frequency R cancer bioconductor
4.7 years ago • updated 4.6 years ago sheneicechang • 0
0
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1
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1.1k
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how to save picture and add title to waterfall GenVisR mutation analyse?
GenVisr genvisr waterfall mutation
updated 5.4 years ago by ▴ 30 • written 5.5 years ago by • 0
0
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1
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836
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Issues with lohSpec
genvisr lohSpec
5.9 years ago dharia.priyadarshani • 0
0
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2
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1.1k
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Copy Number plot cnSpec - how to order samples
genvisr
6.0 years ago cedric.vmdl • 0
0
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4
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1.9k
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GenVisR- cnSpec CNV plot
GenVisR
6.3 years ago daijieqiong ▴ 10
0
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2
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1.2k
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an error in TvTi: package GenVisR
GenVisR
updated 7.3 years ago by ▴ 30 • written 7.3 years ago by ▴ 670
2
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5
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2.7k
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GenVisR Installation error message
genvisR
8.2 years ago Deep Adhya ▴ 20
13 results • Page 1 of 1
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Comment: Numerical differences in DESeq2 output depending on different design matrix cons by JKim • 0
The 1st model has an interaction term, but the 2nd model doesn't have the interaction term. That makes the difference.
Comment: Ensembl plants at annotationHub? by Daniele • 0
Hi, I'm using Ensembl Plants release 59 with the IWGSC RefSeq v1.1 gene annotation. Thanks a lot for replying so quickly!
Comment: Numerical differences in DESeq2 output depending on different design matrix cons by swbarnes2 ★ 1.4k
If you restrict yourself to, say, genes with a baseMean > 50, are the numerical differences between the two designs significant?
Comment: DESeq2- Mysterious interaction suppresses DEGs by shaunpeterson • 0
The images I tried to attach didn't attach. Here is the PCA (MDS) of all the samples, with the Cortex outlier highlighed. ![enter image de…
Comment: STRINGdb : error with string_db$plot_network() by damian.szk ▴ 80
ok. Forcing non-secure protocol should not be needed anymore, due to changes in the underlying library. However, I will look at why "HTTP" …
Votes
Answer: Error while installing BiocManager::install("org.Vdahliae.eg.db")
Comment: How can I create a eigencorplot of pca created from deseq2 object with PCAtools
Answer: Importing a GraphNEL into Cytoscape with RCy3 with error: "Error in cyrestPUT(pa
Answer: Importing a GraphNEL into Cytoscape with RCy3 with error: "Error in cyrestPUT(pa
Rsubread counting peaks ATACseq
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