Bioconductor GenVisR

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GenVisR GenVis

updated 6 months ago by zlskidmore ▴ 30 • written 22 months ago by abhisikta • 0

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genvisR

8.2 years ago Deep Adhya ▴ 20

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GenVisR

6.3 years ago daijieqiong ▴ 10

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genvisr

6.0 years ago cedric.vmdl • 0

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836

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genvisr lohSpec

5.9 years ago dharia.priyadarshani • 0

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GenVisr genvisr waterfall mutation

updated 5.4 years ago by zlskidmore ▴ 30 • written 5.5 years ago by ZihaoXing • 0

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GenVisR mutation frequency R cancer bioconductor

4.7 years ago • updated 4.6 years ago sheneicechang • 0

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706

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GenVisR ggplot2 waterfall

4.6 years ago sheneicechang • 0

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1.0k

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variants waterfall GenVisR

updated 3.5 years ago by zlskidmore ▴ 30 • written 3.5 years ago by Jeni ▴ 10

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GenVisR maftools

23 months ago e • 0

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Install mainDropMut GenVisR

updated 23 months ago by Hervé Pagès 16k • written 23 months ago by Michel • 0

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401

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GenVisR GenCov

19 months ago Amy_ • 0

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1.2k

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GenVisR

updated 7.3 years ago by zlskidmore ▴ 30 • written 7.3 years ago by Bogdan ▴ 670

13 results • Page 1 of 1

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Comment: Numerical differences in DESeq2 output depending on different design matrix cons by JKim • 0

The 1st model has an interaction term, but the 2nd model doesn't have the interaction term. That makes the difference.

Comment: Ensembl plants at annotationHub? by Daniele • 0

Hi, I'm using Ensembl Plants release 59 with the IWGSC RefSeq v1.1 gene annotation. Thanks a lot for replying so quickly!

Comment: Numerical differences in DESeq2 output depending on different design matrix cons by swbarnes2 ★ 1.4k

If you restrict yourself to, say, genes with a baseMean > 50, are the numerical differences between the two designs significant?

Comment: DESeq2- Mysterious interaction suppresses DEGs by shaunpeterson • 0

The images I tried to attach didn't attach. Here is the PCA (MDS) of all the samples, with the Cortex outlier highlighed. ![enter image de…

Comment: STRINGdb : error with string_db$plot_network() by damian.szk ▴ 80

ok. Forcing non-secure protocol should not be needed anymore, due to changes in the underlying library. However, I will look at why "HTTP" …

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Answer: Error while installing BiocManager::install("org.Vdahliae.eg.db")

Comment: How can I create a eigencorplot of pca created from deseq2 object with PCAtools

Answer: Importing a GraphNEL into Cytoscape with RCy3 with error: "Error in cyrestPUT(pa

Rsubread counting peaks ATACseq

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